Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000039_07469638_07472925 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000039 |
| NCBI id | null |
| chromosome length | 8355537 |
| location | 7468923 ~ 7472996 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| complement C1q-like factor, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000039_07469638_07472925.mRNA | True | 1491 | mRNA | 0.42 | 4 | 7468923 | 7472996 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000039_07463037_07464915 | NA | coding | upstream | 3722 | 7463037 ~ 7465201 (+) |
| CI01000039_07460749_07461491 | TPPP3, TPPP2 | coding | upstream | 6898 | 7460597 ~ 7462025 (+) |
| CI01000039_07442137_07446489 | NA | coding | upstream | 21763 | 7441592 ~ 7447160 (+) |
| CI01000039_07425682_07427826 | GJD1A | coding | upstream | 40966 | 7425682 ~ 7427957 (+) |
| CI01000039_07412923_07415375 | NA | coding | upstream | 53398 | 7412721 ~ 7415525 (+) |
| CI01000039_07474049_07478088 | TAGL, TAGLN2, TAGL2, TAGLN | coding | downstream | 755 | 7473751 ~ 7478606 (+) |
| CI01000039_07512584_07512877 | NA | coding | downstream | 39483 | 7512479 ~ 7512984 (+) |
| CI01000039_07604862_07616660 | NA | coding | downstream | 131866 | 7604862 ~ 7616660 (+) |
| CI01000039_07673393_07690390 | KLHL13 | coding | downstream | 200397 | 7673393 ~ 7691259 (+) |
| CI01000039_07702176_07705973 | NA | coding | downstream | 229180 | 7702176 ~ 7706101 (+) |
| G181962 | NA | non-coding | upstream | 66623 | 7400581 ~ 7402300 (+) |
| G182014 | NA | non-coding | upstream | 68526 | 7400166 ~ 7400397 (+) |
| G182004 | NA | non-coding | upstream | 84614 | 7383566 ~ 7384309 (+) |
| G182000 | NA | non-coding | upstream | 118718 | 7349972 ~ 7350205 (+) |
| G181999 | NA | non-coding | upstream | 121721 | 7346805 ~ 7347202 (+) |
| G182067 | NA | non-coding | downstream | 8642 | 7481638 ~ 7482002 (+) |
| G182063 | NA | non-coding | downstream | 12099 | 7485095 ~ 7485424 (+) |
| G182054 | NA | non-coding | downstream | 36596 | 7509592 ~ 7511146 (+) |
| G182051 | NA | non-coding | downstream | 42300 | 7515296 ~ 7515637 (+) |
| G182048 | NA | non-coding | downstream | 46030 | 7519026 ~ 7526562 (+) |
| CI01000039_07324920_07329407 | NA | other | upstream | 144226 | 7324596 ~ 7329472 (+) |
| CI01000039_04829464_04847182 | ZFR | other | upstream | 2620360 | 4829413 ~ 4848563 (+) |
| CI01000039_04223888_04224220 | EMC6.S, EMC6, EMC6.L | other | upstream | 3244266 | 4223868 ~ 4224657 (+) |
| G180156 | NA | other | upstream | 3377315 | 4090998 ~ 4091608 (+) |
| G180149 | NA | other | upstream | 3389360 | 4079419 ~ 4079563 (+) |
| CI01000039_07898330_07904918 | DPF2 | other | downstream | 422880 | 7896773 ~ 7905162 (+) |
