CI01000039_07512584_07512877


Basic Information

Item Value
gene id CI01000039_07512584_07512877
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7512479 ~ 7512984 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_07512584_07512877.mRNA
AAATAAAAGCCCCTCAAACTTCATATCTATGCACTGTTTTGTCTATACATTCAAAAAAATCATAAAAAGAAAAGTCCTAGTTTTCACAGACCAATTTCACCTCAGATGGAGAGTACACCTTCTCACGGTGTCAACTACATCGTTTCAGGACATTCTGATGTTGTGTTCCAAAATAAGAGCCCCCAAAAACTCATGTTTCGGCTGTTTTGTCTACACATTCAGAAAATCATAAAAAGAAAAGTTCTAGCTTCCACAAACCAAATTCACCTCAGATGGAGAGTACACCTTCTCACGGTGTCAACTACATCGTTTCAAGACATTCTGATGTTGTATTCCAAAATAAGAGCCCCCCAAATCTCGTGTTTCAGCTGTTTTGACTGTACATTCAGAAAATCATAAAAAGAAAAGTCCTGGTTTCCACAAAACAAATTCACCTCAGATAGAGAGTACACCTTCTCAAGGTGTCAACTACACAGTTTCAGAACATTCTGATGTTGTATTCCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_07512584_07512877.mRNA True 506 mRNA 0.37 1 7512479 7512984

Neighbor

gene id symbol gene type direction distance location
CI01000039_07474049_07478088 TAGL, TAGLN2, TAGL2, TAGLN coding upstream 33873 7473751 ~ 7478606 (+)
CI01000039_07469638_07472925 NA coding upstream 39483 7468923 ~ 7472996 (+)
CI01000039_07463037_07464915 NA coding upstream 47278 7463037 ~ 7465201 (+)
CI01000039_07460749_07461491 TPPP3, TPPP2 coding upstream 50454 7460597 ~ 7462025 (+)
CI01000039_07442137_07446489 NA coding upstream 65319 7441592 ~ 7447160 (+)
CI01000039_07604862_07616660 NA coding downstream 91878 7604862 ~ 7616660 (+)
CI01000039_07673393_07690390 KLHL13 coding downstream 160409 7673393 ~ 7691259 (+)
CI01000039_07702176_07705973 NA coding downstream 189192 7702176 ~ 7706101 (+)
CI01000039_07723565_07724142 NA coding downstream 210581 7723565 ~ 7724756 (+)
CI01000039_07729075_07732016 NA coding downstream 216091 7729075 ~ 7732038 (+)
G182054 NA non-coding upstream 1333 7509592 ~ 7511146 (+)
G182063 NA non-coding upstream 27055 7485095 ~ 7485424 (+)
G182067 NA non-coding upstream 30477 7481638 ~ 7482002 (+)
G181962 NA non-coding upstream 110179 7400581 ~ 7402300 (+)
G182014 NA non-coding upstream 112082 7400166 ~ 7400397 (+)
G182051 NA non-coding downstream 2312 7515296 ~ 7515637 (+)
G182048 NA non-coding downstream 6042 7519026 ~ 7526562 (+)
G182091 NA non-coding downstream 28327 7541311 ~ 7572931 (+)
G182141 NA non-coding downstream 265644 7778628 ~ 7778831 (+)
G182055 NA non-coding downstream 406741 7919725 ~ 7922591 (+)
CI01000039_07324920_07329407 NA other upstream 187782 7324596 ~ 7329472 (+)
CI01000039_04829464_04847182 ZFR other upstream 2663916 4829413 ~ 4848563 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 3287822 4223868 ~ 4224657 (+)
G180156 NA other upstream 3420871 4090998 ~ 4091608 (+)
G180149 NA other upstream 3432916 4079419 ~ 4079563 (+)
CI01000039_07898330_07904918 DPF2 other downstream 382892 7896773 ~ 7905162 (+)

Expression


Co-expression Network