Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000039_07702176_07705973 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000039 |
| NCBI id | null |
| chromosome length | 8355537 |
| location | 7702176 ~ 7706101 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| pol polyprotein, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000039_07702176_07705973.mRNA | True | 1507 | mRNA | 0.43 | 5 | 7702176 | 7706101 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000039_07673393_07690390 | KLHL13 | coding | upstream | 10917 | 7673393 ~ 7691259 (+) |
| CI01000039_07604862_07616660 | NA | coding | upstream | 85516 | 7604862 ~ 7616660 (+) |
| CI01000039_07512584_07512877 | NA | coding | upstream | 189192 | 7512479 ~ 7512984 (+) |
| CI01000039_07474049_07478088 | TAGL, TAGLN2, TAGL2, TAGLN | coding | upstream | 223570 | 7473751 ~ 7478606 (+) |
| CI01000039_07469638_07472925 | NA | coding | upstream | 229180 | 7468923 ~ 7472996 (+) |
| CI01000039_07723565_07724142 | NA | coding | downstream | 17464 | 7723565 ~ 7724756 (+) |
| CI01000039_07729075_07732016 | NA | coding | downstream | 22974 | 7729075 ~ 7732038 (+) |
| CI01000039_07738530_07773662 | LTBP3 | coding | downstream | 31095 | 7737196 ~ 7774566 (+) |
| CI01000039_07819978_07868788 | NA | coding | downstream | 113877 | 7819978 ~ 7868788 (+) |
| CI01000039_07884248_07885003 | CDC42EP2 | coding | downstream | 177948 | 7884049 ~ 7885934 (+) |
| G182091 | NA | non-coding | upstream | 129245 | 7541311 ~ 7572931 (+) |
| G182048 | NA | non-coding | upstream | 175614 | 7519026 ~ 7526562 (+) |
| G182051 | NA | non-coding | upstream | 186539 | 7515296 ~ 7515637 (+) |
| G182054 | NA | non-coding | upstream | 191030 | 7509592 ~ 7511146 (+) |
| G182063 | NA | non-coding | upstream | 216752 | 7485095 ~ 7485424 (+) |
| G182141 | NA | non-coding | downstream | 72527 | 7778628 ~ 7778831 (+) |
| G182055 | NA | non-coding | downstream | 213624 | 7919725 ~ 7922591 (+) |
| G182065 | NA | non-coding | downstream | 216953 | 7923054 ~ 7927686 (+) |
| G182184 | NA | non-coding | downstream | 274307 | 7980408 ~ 7980666 (+) |
| G182185 | NA | non-coding | downstream | 275343 | 7981444 ~ 7981994 (+) |
| CI01000039_07324920_07329407 | NA | other | upstream | 377479 | 7324596 ~ 7329472 (+) |
| CI01000039_04829464_04847182 | ZFR | other | upstream | 2853613 | 4829413 ~ 4848563 (+) |
| CI01000039_04223888_04224220 | EMC6.S, EMC6, EMC6.L | other | upstream | 3477519 | 4223868 ~ 4224657 (+) |
| G180156 | NA | other | upstream | 3610568 | 4090998 ~ 4091608 (+) |
| G180149 | NA | other | upstream | 3622613 | 4079419 ~ 4079563 (+) |
| CI01000039_07898330_07904918 | DPF2 | other | downstream | 189775 | 7896773 ~ 7905162 (+) |
