CI01000039_07723565_07724142


Basic Information

Item Value
gene id CI01000039_07723565_07724142
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7723565 ~ 7724756 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_07723565_07724142.mRNA
AAACAGAAGATTACAATGTACTCGAAGACACTACCACTGAGCCTCCCAGCTCATCCTCCACTACCCCTGAAGACAGAGAACTCGATTTTTGCGACTACAGCATGTGTATTGAGTATCAGAAAACCTGCGCAGACCTTGCAGAAGGCTGCCTCTGCCCGGGGTTGGAAAGTTTCCATCCCCCGAGTCCACCGTTAATCTCGAATCTGACTCAACAGGGTGACAAAGGGGTTGTGGTGTACTGGTGTGCTCCGACCTCCATTGTCACCCACTACAAAGTCTTGGTGAAAGGCAAGGACAGAGTTATTCATTGGGAGACAGAGGTGGAAGAGAAAAAAAGGGCAATAGCATTGCGGGATGTGGCGGCTGGTGCGCTCGTGTGTGTAGTAGCGGTGAATAAGTTCGGCAACAGCACAGAGACGTGTAACACATTTGAACCCCAACGTCCAGGCTCTGGACTTGCGCTGAAGCTGGGCATAATTGGAGGTGTGGTGGGACTCATAGTTCTGCTGATTCTGGCTCTGCTGCTGTGGAGACACAAAAAACGGCGGGAATCTTCAGAGACAAGGGGAGTTCTGTAACAGAGAGGAAGGAGCGTGCGTGTGTGTGGGGCCATAAATATGCACTTAATCTTGGAATGCATGATAGGAGTAAATGAATGACTGTGGACTGATAGCCCACTGTGAGCATGCTGGATAGAGGGGGAGTGTATTAATGACTCAATGAAAGAGGGGTGCAGAGAAGGTGGACGAATGACTCAGCACATTCTTCTCATTTGGTCGTCAGTAGTGTCTAACAATGTGATTTTGGACAGGCACAAATTGCAGACTGCTGGTGTCAAGTCAAGTCAAGTCACCTTTATTTATATAGCGCTTTTTACAATGTAGATTGTGTCAAAGCAGCTTTACATTGATATCTGGTACATTGTTTGACTGCACAGCAGCTCTTAAAGAATAGTGTCAATGCAGGCAGATCAAAAGCACTGTTGAATATCAAAATGTCAAGTCAAGTGTCCCCAACAGTGTGCTGACTCTAATCATGGGCACCATTTCAAGTCCAATTCCCAAATCACCAACACACTTTAAACTTGTGTATGTCTTGTGTATGTTTAAACTTGAGGTTTTGCTACAAAAAAATATGAAGCTTACAAAATAATAAAAAATATTTTTTATTTTTGGGGTGGTTTATTTTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_07723565_07724142.mRNA True 1192 mRNA 0.45 1 7723565 7724756

Neighbor

gene id symbol gene type direction distance location
CI01000039_07702176_07705973 NA coding upstream 17464 7702176 ~ 7706101 (+)
CI01000039_07673393_07690390 KLHL13 coding upstream 32306 7673393 ~ 7691259 (+)
CI01000039_07604862_07616660 NA coding upstream 106905 7604862 ~ 7616660 (+)
CI01000039_07512584_07512877 NA coding upstream 210581 7512479 ~ 7512984 (+)
CI01000039_07474049_07478088 TAGL, TAGLN2, TAGL2, TAGLN coding upstream 244959 7473751 ~ 7478606 (+)
CI01000039_07729075_07732016 NA coding downstream 4319 7729075 ~ 7732038 (+)
CI01000039_07738530_07773662 LTBP3 coding downstream 12440 7737196 ~ 7774566 (+)
CI01000039_07819978_07868788 NA coding downstream 95222 7819978 ~ 7868788 (+)
CI01000039_07884248_07885003 CDC42EP2 coding downstream 159293 7884049 ~ 7885934 (+)
CI01000039_07898330_07904918 DPF2 coding downstream 172017 7896773 ~ 7905162 (+)
G182091 NA non-coding upstream 150634 7541311 ~ 7572931 (+)
G182048 NA non-coding upstream 197003 7519026 ~ 7526562 (+)
G182051 NA non-coding upstream 207928 7515296 ~ 7515637 (+)
G182054 NA non-coding upstream 212419 7509592 ~ 7511146 (+)
G182063 NA non-coding upstream 238141 7485095 ~ 7485424 (+)
G182141 NA non-coding downstream 53872 7778628 ~ 7778831 (+)
G182055 NA non-coding downstream 194969 7919725 ~ 7922591 (+)
G182065 NA non-coding downstream 198298 7923054 ~ 7927686 (+)
G182184 NA non-coding downstream 255652 7980408 ~ 7980666 (+)
G182185 NA non-coding downstream 256688 7981444 ~ 7981994 (+)
CI01000039_07324920_07329407 NA other upstream 398868 7324596 ~ 7329472 (+)
CI01000039_04829464_04847182 ZFR other upstream 2875002 4829413 ~ 4848563 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 3498908 4223868 ~ 4224657 (+)
G180156 NA other upstream 3631957 4090998 ~ 4091608 (+)
G180149 NA other upstream 3644002 4079419 ~ 4079563 (+)

Expression


Co-expression Network