CI01000039_08083646_08085318


Basic Information

Item Value
gene id CI01000039_08083646_08085318
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 8083646 ~ 8086184 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_08083646_08085318.mRNA
ATGGAGGAGGCTGCAGCAGCAAAACAAACTGAAAAACTGTTGGCCGAGGCATGTTTATATTGTCGGAGTAAATGCCAATCACTAGCGAAAACCACGTTAGCCAAACCCCGTAAGTCACATCACCAAAAACAGCAGGCTAAGAGGGAGATAACACACCCAGATAGCAAGAAAATGGCAGAAATAGAGATTATTCCAGCTGATGCTGCAGACTTGGGGAACTCACCCAGATTTACCCTGAAGATTGTGACTGAGCAGACACATGCAACAGAGCTTGTGGAGATGTTAACTCGTAGAGGTCGCTCTGTTGAGGTTTCAGATCGCCATAGTAACCCCTCTGTCTCTGCTGTTACAGAAGATGATGACAACAACCAAGATTACACTGATGCAATACAGAATATATAAATCTCTGTGTAGTTTAGGAATTTTTTAATCATAACGTTTAGTTTAGCTACTAGAATGAATTCAATTATAAATATAGAACTATGTAAACAAGTGAATTTGTTATTTTGTGTGCAACAAGAACATGGACTGAAAGACATATGAATCACATTTGTTTTTCAATTATTGGACACACGAGTTTACTCAAAGGGTCCAGCATTCCCATGAACCTACACAGGACAAGCTCTGGAGAAAGGATACTCAGTCTAAATGCTTCATACATATGTATTTAGTATCTGTAACTTGAACATGACAAAACGAGGCTGTAAAATGTACAATGTTACATTTTGTTGGAGGATTTAATTGGTTATCAATACACATACACATTCAAACAAATGTATTCAATTAGATTAAGGTTCAAAACTGACATTGATGAAGATCAGGAAAATACATTTAAAATATGAAACAATTCATCTGTGCAGAATTTAAACTGGAATTTTGTTAAGTCATTATTCTGACGTAGTACAGGGAAGCGCTGCACTGTCTATACAACGTAAACACCATAGGAGACTGATGGGAGAGACGAAATTGCTGAATGAAGTTATTTTTGTTTTGTTTTTGCACACAAAAAGTATTCTTGTCGCTTCATACCACTGTAGTCACGTTGACTATTTAATGTCTTTACTACTTTTCTGGATCTTAAATGTGGTAATTACGTTGCTTTCTGTGGGGGATAAAAAAAAAAAACTCTTGGATTTCATTAAAAATATCTTAATTTGTGTTCTGAAGATGAACGAAGGTTTTATGGATGTGGAACAGCATGAGGGTGAGTAATTAATGACAGAAATTTCATTTTTGGGTGAACTAACCCTTTAAGTGAAATGTTGCCA

Function

NR:

description
uncharacterized protein LOC793802

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_08083646_08085318.mRNA True 1268 mRNA 0.36 2 8083646 8086184

Neighbor

gene id symbol gene type direction distance location
CI01000039_08052093_08053571 APOA1A coding upstream 29936 8051815 ~ 8053710 (+)
CI01000039_08044880_08049054 PAFAH1B2 coding upstream 33618 8044880 ~ 8050028 (+)
CI01000039_08014352_08018949 TMPRSS4B coding upstream 64531 8013606 ~ 8019115 (+)
CI01000039_07972168_07974927 INS coding upstream 108624 7971946 ~ 7975022 (+)
CI01000039_07965528_07969798 PANX1B, PANX1 coding upstream 113734 7965528 ~ 7969912 (+)
CI01000039_08113233_08115430 NA coding downstream 27049 8113233 ~ 8116142 (+)
CI01000039_08166944_08171773 NA coding downstream 80669 8166853 ~ 8171773 (+)
CI01000039_08200873_08207267 GNB2 coding downstream 112950 8199134 ~ 8208124 (+)
CI01000039_08302787_08303257 NA coding downstream 216603 8302787 ~ 8303472 (+)
CI01000039_08323007_08331689 SVOP, SVOPA coding downstream 236823 8323007 ~ 8331754 (+)
G182197 NA non-coding upstream 6604 8076837 ~ 8077042 (+)
G182195 NA non-coding upstream 8547 8074680 ~ 8075099 (+)
G182194 NA non-coding upstream 9105 8074337 ~ 8074541 (+)
G182185 NA non-coding upstream 101652 7981444 ~ 7981994 (+)
G182184 NA non-coding upstream 102980 7980408 ~ 7980666 (+)
G182203 NA non-coding downstream 2648 8088832 ~ 8089206 (+)
G182239 NA non-coding downstream 200789 8286973 ~ 8291456 (+)
G182242 NA non-coding downstream 206387 8292571 ~ 8292915 (+)
G182248 NA non-coding downstream 229890 8316074 ~ 8316325 (+)
G182250 NA non-coding downstream 235648 8321832 ~ 8322058 (+)
CI01000039_07898330_07904918 DPF2 other upstream 184890 7896773 ~ 7905162 (+)
CI01000039_07324920_07329407 NA other upstream 758949 7324596 ~ 7329472 (+)
CI01000039_04829464_04847182 ZFR other upstream 3235083 4829413 ~ 4848563 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 3858989 4223868 ~ 4224657 (+)
G180156 NA other upstream 3992038 4090998 ~ 4091608 (+)

Expression


Co-expression Network