G179875


Basic Information

Item Value
gene id G179875
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 3262870 ~ 3264103 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU204230
GAATTGTTAAAGTGGCTCTCCTCAAAATTGCTTGGGATCTCAGCTTTTTGGAGGAATCTCATTAGAATCACAGTCCGGGTAATAAGTTCTCTGGAGCACACTCTTCAAAACTACACAGTCAGAAGCACTGCCTCTTGAAGCGACAGCGAGATCCAGCAAAAATCTACTCCTCCCCTTTCACACACACAGCCAGAGCAAACAGACACAAAGGGGAACCAATTAGTGGCAGGACAGACAGAGTGCAGCCAAGCTTATAGTCGGTCTTAGAGACTTAATGTGATAGAGAAACGCAGATATCATCACTGAGTGAACTGTAAAATGAGAGGAGCTCCTTATTGGTTGGGAATTCATCTTCGCTTTAGCATTAGCATTAAAGCTGATGCTTATCTTCTAAGAGTGGGCTAGAAAGGATCCATACTGCATGAAACAGACAGACAGACAGACTCCCAACAGACAGACTCACAACTCCCAAGTTGTTCAGTGATGTTTAATGTACTTTGAATATGGTAAAGCACTTGGAATCTGGTTTTAAGTGAGAGTGGAACTTAAAGGCCCACTGAAGTGCCTTGGAACGTGCAGCATTATTCAATGGGTTGACGTAATTTACACTGAAACAGGACGTTTTTTTAAATAGCCAACAGCATTTTGCTTATATTGCAGCTCGGCCAGAGCTGTTGAGCTCTGTAAAGCCTCAGTTTCCTTCTAATCTCTAATTGTTTCTCCTCCTAATCTCCTCCATCGCTTTAAAATATAGCATTCTGTGCAGAATTCAAATGGATCCGATAGGTTTTGTGATCTGCGCCGACTCGCACATATGATCCGCTCTGTGCTATTGGTGCCATTCACCATGTAGAAATTAGTAAATGTGTGAACAATTGACCGATTTTAGCTGCAGCTATTTATAATGTAGGGGGCGGGGCACTTTAGATTCCAGAGAGCATTTGATTGGACAGAAAATCTGATGAGAAGCTCAAGTGCAGCATGATGTCATCAAAATCATTGATCCATATTGGTGGAAGTGAAAGACTGTAAGTTTTGAATGCTTATATATTCTAAATACGAATTTTGTCATTGTTTTGGAGCACACTAGCTTATAAATAACAGTAAGGCTGTTAAAACATATTCATATTAAAAGCCAAAAAACTTCAATTTTGATTTCATGGGGACTTTAAGCATTTGGGGTTGGACTAAGGATGGGATCCAATGAAGCATGTGGGGCAGTGTTATTTTAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204230 True 1234 lncRNA 0.41 1 3262870 3264103

Neighbor

gene id symbol gene type direction distance location
CI01000039_03181221_03188468 FBP2 coding upstream 73635 3180393 ~ 3189235 (+)
CI01000039_03170952_03179241 FBP1.S, F16P1, FBP1B, FBP1, FBP2, FBP1A coding upstream 83597 3169850 ~ 3179273 (+)
CI01000039_02934780_02935076 NA coding upstream 327640 2934635 ~ 2935230 (+)
CI01000039_02740498_02764324 NPFFR2A, NPFFR2 coding upstream 498042 2740242 ~ 2764828 (+)
CI01000039_02724018_02725548 NA coding upstream 537206 2724018 ~ 2725664 (+)
CI01000039_03352914_03354134 GAS1A coding downstream 87427 3351530 ~ 3354476 (+)
CI01000039_03359162_03369982 NA coding downstream 94792 3358895 ~ 3370403 (+)
CI01000039_03454189_03458136 NA coding downstream 189937 3454040 ~ 3458140 (+)
CI01000039_03596770_03597721 NA coding downstream 331894 3595997 ~ 3597726 (+)
CI01000039_03651436_03658228 NA coding downstream 387333 3651436 ~ 3658264 (+)
G179874 NA non-coding upstream 556 3261973 ~ 3262314 (+)
G179873 NA non-coding upstream 2056 3260606 ~ 3260814 (+)
G179872 NA non-coding upstream 2427 3259668 ~ 3260443 (+)
G179871 NA non-coding upstream 5469 3256920 ~ 3257401 (+)
G179870 NA non-coding upstream 6210 3256261 ~ 3256660 (+)
G179876 NA non-coding downstream 2426 3266529 ~ 3267121 (+)
G179802 NA non-coding downstream 3709 3267812 ~ 3268228 (+)
G179883 NA non-coding downstream 16673 3280776 ~ 3281437 (+)
G179893 NA non-coding downstream 59235 3323338 ~ 3323607 (+)
G179909 NA non-coding downstream 107723 3371826 ~ 3372040 (+)
G179798 NA other upstream 130686 3129572 ~ 3132184 (+)
G179528 NA other upstream 764251 2497674 ~ 2498619 (+)
G178423 NA other upstream 2277118 966676 ~ 982406 (+)
G179903 NA other downstream 159934 3424037 ~ 3425555 (+)
CI01000039_04048342_04049635 NA other downstream 784190 4048079 ~ 4049972 (+)
G180149 NA other downstream 810773 4079419 ~ 4079563 (+)
G180156 NA other downstream 826895 4090998 ~ 4091608 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other downstream 959476 4223868 ~ 4224657 (+)

Expression


Co-expression Network