G179933


Basic Information

Item Value
gene id G179933
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 3402034 ~ 3402456 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU204295
GATGAACAGCAGGAGGATTAGGAAGACTGTGCGGGGACAGAAGTGAGTCTGTCAGGTCTGATTTCAGATCCAGTATGACAGGACGTGGGATTCACCCTCTGCATTGGGGAAAACAGAGCTGATCCGAGTCTAGGCCAAGCCATGTGGGGGGCCCACAGGGAAAGTGAGGCCCGTTTTTACACTGCTTGTAGCTGGACAATACAGTAACTATGCAACACAAATCTTTTTTTTTTCTTTTTTTCTTTCTTTCTTTTTTTTTTCTTTTTTTTTTTTTGGCTGTACTGTGTTGGTTCTTTAAACTAACACAGGTTAAGTTAAAACGTATTATTTCAGCTGTGAAGTTGTTTAAATCATCATATTACCATCATTTTAGGGTTTATGGTGCAATGTTAACACCCATATTGTTTACAACTTTATTGAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204295 True 423 lncRNA 0.39 1 3402034 3402456

Neighbor

gene id symbol gene type direction distance location
CI01000039_03359162_03369982 NA coding upstream 31631 3358895 ~ 3370403 (+)
CI01000039_03352914_03354134 GAS1A coding upstream 47558 3351530 ~ 3354476 (+)
CI01000039_03181221_03188468 FBP2 coding upstream 212799 3180393 ~ 3189235 (+)
CI01000039_03170952_03179241 FBP1.S, F16P1, FBP1B, FBP1, FBP2, FBP1A coding upstream 222761 3169850 ~ 3179273 (+)
CI01000039_02934780_02935076 NA coding upstream 466804 2934635 ~ 2935230 (+)
CI01000039_03454189_03458136 NA coding downstream 51584 3454040 ~ 3458140 (+)
CI01000039_03596770_03597721 NA coding downstream 193541 3595997 ~ 3597726 (+)
CI01000039_03651436_03658228 NA coding downstream 248980 3651436 ~ 3658264 (+)
CI01000039_03659569_03662364 NA coding downstream 257113 3659569 ~ 3662652 (+)
CI01000039_03665710_03683733 NA coding downstream 262791 3665247 ~ 3683850 (+)
G179909 NA non-coding upstream 29994 3371826 ~ 3372040 (+)
G179893 NA non-coding upstream 78427 3323338 ~ 3323607 (+)
G179883 NA non-coding upstream 120597 3280776 ~ 3281437 (+)
G179802 NA non-coding upstream 133806 3267812 ~ 3268228 (+)
G179876 NA non-coding upstream 134913 3266529 ~ 3267121 (+)
G179900 NA non-coding downstream 6835 3409291 ~ 3410398 (+)
G179901 NA non-coding downstream 8551 3411007 ~ 3411431 (+)
G179899 NA non-coding downstream 9336 3411792 ~ 3414176 (+)
G179951 NA non-coding downstream 58134 3460590 ~ 3461396 (+)
G179959 NA non-coding downstream 85592 3488048 ~ 3488365 (+)
G179798 NA other upstream 269850 3129572 ~ 3132184 (+)
G179528 NA other upstream 903415 2497674 ~ 2498619 (+)
G178423 NA other upstream 2416282 966676 ~ 982406 (+)
G179903 NA other downstream 21581 3424037 ~ 3425555 (+)
CI01000039_04048342_04049635 NA other downstream 645837 4048079 ~ 4049972 (+)
G180149 NA other downstream 672420 4079419 ~ 4079563 (+)
G180156 NA other downstream 688542 4090998 ~ 4091608 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other downstream 821123 4223868 ~ 4224657 (+)

Expression


Co-expression Network