G180149


Basic Information

Item Value
gene id G180149
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 4079419 ~ 4079563 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU204548
TAATCTCACTGACACAGACAAGCACAGTTCATCAAGAACAAGAAGACGATGAAGACTATTGCAGCTTTTGTTCTTCTTGCCTGCCTGATCGCTGTAGGAGTGAAAGGGCAGGACAAGTCTTCGAAGGGCAGGTGCTTCTGTGCAGACAAAGGTGCAAACATGGTTTTAGTGAAGAACATTGAGAAGGTTGAAATCATCCCTCCAAGTCCATCTTGTCGCAAACATGAGATTATTGTCACTCTGAAGAATGGTGCAGGACGGAAATGCATGAATCCAGAGTCAAAATTCACTCAAAATATCATAAAGGCTCTTGAGAAGAGGAGCCAGCAGTCTGTGCACCACAGTACAACTGTCACTGCGCCACAGAAGAACATCCTGACATCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
>TU204549
TAATCTCACTGACACAGACAAGCACAGTTCATCAAGAACAAGAAGACGATGAAGACTATTGCAGCTTTTGTTCTTCTTGCCTGCCTGATCGCTGTAGGAGTGAAAGCGCAGGGCAGGTCTTCGAAGGGCAGGTGCTTCTGTGCAGACAAAGGTGCAAACATGGTTTTAGTGAAGAACATTGAGAAGGTTGAAATCCTCCCTCCAAGTCCATCTTGTCGCAAACATGAGATTATTGTCACTCTGAAGAATGGTGCAGGACGGAAATGCATGAATCCAGAGTCAAAATTCACTCAAAATATCATAAAGGCTCTTGAGAAGAGGAGCCAGCAGTCTGTGCACCACAGTACAACTGTCACTGCGCCACAGAAGAACATCCTGACATCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
>TU204550
CATAATCTCACTGACACAGACAAGCACAGTTCATCAAGAACAAGAAGACGATGAAGACTATTGCAGCTTTTGTTCTTCTTGCCTGCCTGATCGCTGTAGGAGTGAAAGCGCAGGGCAGGTCTTCGAAGGGCAGGTGCTTCTGTGCAGACAAAGGTGCAAACATGGTTTTAGTGAAGAACATTGAGAAGGTTGAAATCCTCCCTCCAAGTCCATCTTGTCGCAAACATGAGATTATTGTCACTCTGAAGAATGGTGCAGGACGGAAATGCATGAATCCAGAGTCAAAATTCACTCAAAATATCATAAAGGCTCTTGAGAAGAGGAGCCAGCAGTCTGTGCACCACAGTACAACTGTCACTGCGCCACAGAAGAACATCCTGACATCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204548 True 145 TUCP 0.37 1 4079419 4079563
TU204549 True 145 TUCP 0.38 1 4079419 4079563
TU204550 True 145 TUCP 0.38 1 4079419 4079563

Neighbor

gene id symbol gene type direction distance location
CI01000039_04065787_04066284 NA coding upstream 8245 4065669 ~ 4066653 (+)
CI01000039_04062068_04062375 NA coding upstream 11938 4062003 ~ 4062961 (+)
CI01000039_04058417_04059141 NA coding upstream 15373 4058343 ~ 4059526 (+)
CI01000039_04048342_04049635 NA coding upstream 24913 4048079 ~ 4049972 (+)
CI01000039_04017602_04018203 GRSF1 coding upstream 56408 4017602 ~ 4018468 (+)
CI01000039_04108687_04120437 FLOT2A, FLT2, FLOT2B, FLOT2 coding downstream 29124 4108687 ~ 4120437 (+)
CI01000039_04198172_04200073 FAM222BA coding downstream 117683 4197246 ~ 4200160 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L coding downstream 144325 4223868 ~ 4224657 (+)
CI01000039_04244908_04247540 CENPV coding downstream 164941 4244504 ~ 4247540 (+)
CI01000039_04295776_04307914 NCOR1 coding downstream 216213 4295776 ~ 4307914 (+)
G180146 NA non-coding upstream 3304 4070588 ~ 4071572 (+)
G180111 NA non-coding upstream 99176 3975058 ~ 3975700 (+)
G180109 NA non-coding upstream 100731 3973909 ~ 3974145 (+)
G180108 NA non-coding upstream 103212 3971459 ~ 3971664 (+)
G180155 NA non-coding downstream 9408 4088971 ~ 4089226 (+)
G180156 NA non-coding downstream 11539 4090998 ~ 4091608 (+)
G180157 NA non-coding downstream 12925 4092488 ~ 4092835 (+)
G180160 NA non-coding downstream 45985 4125548 ~ 4125931 (+)
G180185 NA non-coding downstream 49691 4129254 ~ 4129494 (+)
G179903 NA other upstream 649321 3424037 ~ 3425555 (+)
G179798 NA other upstream 942692 3129572 ~ 3132184 (+)
G179528 NA other upstream 1576257 2497674 ~ 2498619 (+)
G178423 NA other upstream 3089124 966676 ~ 982406 (+)
CI01000039_04829464_04847182 ZFR other downstream 764619 4829413 ~ 4848563 (+)
CI01000039_07324920_07329407 NA other downstream 3241121 7324596 ~ 7329472 (+)
CI01000039_07898330_07904918 DPF2 other downstream 3816313 7896773 ~ 7905162 (+)

Expression


Co-expression Network