Gene
RNA
| Item | Value |
|---|---|
| gene id | G180173 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000039 |
| NCBI id | null |
| chromosome length | 8355537 |
| location | 4214958 ~ 4215578 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| G protein-activated inward rectifier potassium channel 2 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU204590 | True | 621 | lncRNA | 0.42 | 1 | 4214958 | 4215578 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000039_04198172_04200073 | FAM222BA | coding | upstream | 14798 | 4197246 ~ 4200160 (+) |
| CI01000039_04108687_04120437 | FLOT2A, FLT2, FLOT2B, FLOT2 | coding | upstream | 94521 | 4108687 ~ 4120437 (+) |
| CI01000039_04078795_04079273 | NA | coding | upstream | 135685 | 4078745 ~ 4079273 (+) |
| CI01000039_04070151_04075216 | NA | coding | upstream | 139597 | 4070098 ~ 4075361 (+) |
| CI01000039_04065787_04066284 | NA | coding | upstream | 148327 | 4065669 ~ 4066653 (+) |
| CI01000039_04223888_04224220 | EMC6.S, EMC6, EMC6.L | coding | downstream | 8310 | 4223868 ~ 4224657 (+) |
| CI01000039_04244908_04247540 | CENPV | coding | downstream | 28926 | 4244504 ~ 4247540 (+) |
| CI01000039_04295776_04307914 | NCOR1 | coding | downstream | 80198 | 4295776 ~ 4307914 (+) |
| CI01000039_04364813_04366029 | NA | coding | downstream | 148591 | 4364169 ~ 4366231 (+) |
| CI01000039_04370566_04373090 | NA | coding | downstream | 154049 | 4369627 ~ 4373462 (+) |
| G180165 | NA | non-coding | upstream | 79586 | 4134383 ~ 4135372 (+) |
| G180188 | NA | non-coding | upstream | 80944 | 4133761 ~ 4134014 (+) |
| G180185 | NA | non-coding | upstream | 85464 | 4129254 ~ 4129494 (+) |
| G180160 | NA | non-coding | upstream | 89027 | 4125548 ~ 4125931 (+) |
| G180157 | NA | non-coding | upstream | 122123 | 4092488 ~ 4092835 (+) |
| G180183 | NA | non-coding | downstream | 392 | 4215970 ~ 4216186 (+) |
| G180191 | NA | non-coding | downstream | 3570 | 4219148 ~ 4219847 (+) |
| G180180 | NA | non-coding | downstream | 6900 | 4222478 ~ 4222726 (+) |
| G180195 | NA | non-coding | downstream | 23702 | 4239280 ~ 4239507 (+) |
| G180161 | NA | non-coding | downstream | 24735 | 4240313 ~ 4242363 (+) |
| G180156 | NA | other | upstream | 123350 | 4090998 ~ 4091608 (+) |
| G180149 | NA | other | upstream | 135395 | 4079419 ~ 4079563 (+) |
| CI01000039_04048342_04049635 | NA | other | upstream | 164986 | 4048079 ~ 4049972 (+) |
| G179903 | NA | other | upstream | 789403 | 3424037 ~ 3425555 (+) |
| G179798 | NA | other | upstream | 1082774 | 3129572 ~ 3132184 (+) |
| CI01000039_04829464_04847182 | ZFR | other | downstream | 628604 | 4829413 ~ 4848563 (+) |
| CI01000039_07324920_07329407 | NA | other | downstream | 3105106 | 7324596 ~ 7329472 (+) |
| CI01000039_07898330_07904918 | DPF2 | other | downstream | 3680298 | 7896773 ~ 7905162 (+) |
