G180183


Basic Information

Item Value
gene id G180183
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 4215970 ~ 4216186 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU204600
CCAGCATTCTGACAAAGGTGGCCATGACATTGCCTCCATTAAGTGATGCGGCCACTGCCAGATAGGAGCCGTGCAAGTATGGGAAATAAGCAACAGGGGAGAGGGCGTCTGGAGAACTGGGAGGGCTGAACTCTGCAGGCATGCCGAACGTCAGCTGGGCTGAAGTGCTCATATTCAGCACTAGTGATTTAACATAATTCACAATTAATAAGTGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204600 True 217 lncRNA 0.50 1 4215970 4216186

Neighbor

gene id symbol gene type direction distance location
CI01000039_04198172_04200073 FAM222BA coding upstream 15810 4197246 ~ 4200160 (+)
CI01000039_04108687_04120437 FLOT2A, FLT2, FLOT2B, FLOT2 coding upstream 95533 4108687 ~ 4120437 (+)
CI01000039_04078795_04079273 NA coding upstream 136697 4078745 ~ 4079273 (+)
CI01000039_04070151_04075216 NA coding upstream 140609 4070098 ~ 4075361 (+)
CI01000039_04065787_04066284 NA coding upstream 149339 4065669 ~ 4066653 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L coding downstream 7702 4223868 ~ 4224657 (+)
CI01000039_04244908_04247540 CENPV coding downstream 28318 4244504 ~ 4247540 (+)
CI01000039_04295776_04307914 NCOR1 coding downstream 79590 4295776 ~ 4307914 (+)
CI01000039_04364813_04366029 NA coding downstream 147983 4364169 ~ 4366231 (+)
CI01000039_04370566_04373090 NA coding downstream 153441 4369627 ~ 4373462 (+)
G180173 NA non-coding upstream 392 4214958 ~ 4215578 (+)
G180165 NA non-coding upstream 80598 4134383 ~ 4135372 (+)
G180188 NA non-coding upstream 81956 4133761 ~ 4134014 (+)
G180185 NA non-coding upstream 86476 4129254 ~ 4129494 (+)
G180160 NA non-coding upstream 90039 4125548 ~ 4125931 (+)
G180191 NA non-coding downstream 2962 4219148 ~ 4219847 (+)
G180180 NA non-coding downstream 6292 4222478 ~ 4222726 (+)
G180195 NA non-coding downstream 23094 4239280 ~ 4239507 (+)
G180161 NA non-coding downstream 24127 4240313 ~ 4242363 (+)
G180196 NA non-coding downstream 28053 4244239 ~ 4244503 (+)
G180156 NA other upstream 124362 4090998 ~ 4091608 (+)
G180149 NA other upstream 136407 4079419 ~ 4079563 (+)
CI01000039_04048342_04049635 NA other upstream 165998 4048079 ~ 4049972 (+)
G179903 NA other upstream 790415 3424037 ~ 3425555 (+)
G179798 NA other upstream 1083786 3129572 ~ 3132184 (+)
CI01000039_04829464_04847182 ZFR other downstream 627996 4829413 ~ 4848563 (+)
CI01000039_07324920_07329407 NA other downstream 3104498 7324596 ~ 7329472 (+)
CI01000039_07898330_07904918 DPF2 other downstream 3679690 7896773 ~ 7905162 (+)

Expression


Co-expression Network