G181788


Basic Information

Item Value
gene id G181788
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 6535446 ~ 6535787 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU206432
CACAAATGTGGTTCAGGCAACGCGTGCATTGATTATCTTCACTTCACGTAGGCTATATAACAAAACAAAATATAAATCACAACCCTGCCTCTCTTCGTTTTCATTTAAAAAATATGAAACCTATTGTGTGGTTCAGGCAATATGTGCATATGTACTCTGATTATCTTCACTGTATATGTAGCCTATAATAAAATGAAATAAGACAAAACAACCCTCTCTTTTTGTTAAAAGTCAGTTTTAATTATCAATAATAACCATTATAAAAGTATAAGTATAAAGTATGAGAAGCTATACAATAAGAAATAAAGACAAGCAAACAATTCAGTCAAACGTACAGTCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206432 True 342 lncRNA 0.31 1 6535446 6535787

Neighbor

gene id symbol gene type direction distance location
CI01000039_06517676_06525898 NA coding upstream 9499 6517526 ~ 6525947 (+)
CI01000039_06472455_06491979 ERLIN2.S, ERLN2, ERLIN2 coding upstream 42984 6472455 ~ 6492462 (+)
CI01000039_06436994_06439467 PTGER4B coding upstream 95842 6436994 ~ 6439604 (+)
CI01000039_06313617_06317466 ATP1B2B coding upstream 216701 6313433 ~ 6318745 (+)
CI01000039_06288292_06297288 NYAP1 coding upstream 238000 6288162 ~ 6297446 (+)
CI01000039_06584621_06616401 AR coding downstream 48834 6584621 ~ 6616401 (+)
CI01000039_06677303_06686187 AR coding downstream 141516 6677303 ~ 6686864 (+)
CI01000039_06729386_06739661 YIPF6 coding downstream 193599 6729386 ~ 6740315 (+)
CI01000039_06744598_06746185 NA coding downstream 208811 6744598 ~ 6746534 (+)
CI01000039_06808952_06821780 STARD8 coding downstream 273165 6808952 ~ 6821971 (+)
G181787 NA non-coding upstream 7 6535065 ~ 6535439 (+)
G181786 NA non-coding upstream 524 6534680 ~ 6534922 (+)
G181782 NA non-coding upstream 3316 6531858 ~ 6532130 (+)
G181781 NA non-coding upstream 3886 6531360 ~ 6531560 (+)
G181770 NA non-coding upstream 26943 6507892 ~ 6508503 (+)
G181802 NA non-coding downstream 133527 6669314 ~ 6669649 (+)
G181855 NA non-coding downstream 379218 6915005 ~ 6915340 (+)
G181888 NA non-coding downstream 409715 6945502 ~ 6946386 (+)
G181897 NA non-coding downstream 431710 6967497 ~ 6967792 (+)
G181870 NA non-coding downstream 536412 7072199 ~ 7073021 (+)
CI01000039_04829464_04847182 ZFR other upstream 1686883 4829413 ~ 4848563 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 2310789 4223868 ~ 4224657 (+)
G180156 NA other upstream 2443838 4090998 ~ 4091608 (+)
G180149 NA other upstream 2455883 4079419 ~ 4079563 (+)
CI01000039_04048342_04049635 NA other upstream 2485474 4048079 ~ 4049972 (+)
CI01000039_07324920_07329407 NA other downstream 784897 7324596 ~ 7329472 (+)
CI01000039_07898330_07904918 DPF2 other downstream 1360089 7896773 ~ 7905162 (+)

Expression


Co-expression Network