G182067


Basic Information

Item Value
gene id G182067
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7481638 ~ 7482002 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU206775
AAAGCATCTAAACCTGGTTGTAAGCCTAAACTTGACGTAAACTGTAAAAGTGTCCCTCAAATCTGATTGGTTAACTGGAATGTTGTTCCAGGATCAACAAAGATGTTCATCCAGTAACATGCTGCACTTTGTAAAATCAGGTTCTGCAGTTTCTCCCGCCACCAGCCCCTCATCTAGGAGGAGGGTGGTGGTCATAGTAATGTCAGGGTTATGTGTCTGTTTAGTTTCACTGTGTTTTGGTTTCGTTTTCCCTGTTCCCGTTTTGCCTGTGTTTCTTGGTCATTAGGTTCTGATTAATCCCGCAACCGTTTCTGTTCTGGTAATTAACTCTCCCTGGTTTTTAAGCCCTTAGTTTCCTCAGTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206775 True 365 lncRNA 0.43 1 7481638 7482002

Neighbor

gene id symbol gene type direction distance location
CI01000039_07474049_07478088 TAGL, TAGLN2, TAGL2, TAGLN coding upstream 3032 7473751 ~ 7478606 (+)
CI01000039_07469638_07472925 NA coding upstream 8642 7468923 ~ 7472996 (+)
CI01000039_07463037_07464915 NA coding upstream 16437 7463037 ~ 7465201 (+)
CI01000039_07460749_07461491 TPPP3, TPPP2 coding upstream 19613 7460597 ~ 7462025 (+)
CI01000039_07442137_07446489 NA coding upstream 34478 7441592 ~ 7447160 (+)
CI01000039_07512584_07512877 NA coding downstream 30477 7512479 ~ 7512984 (+)
CI01000039_07604862_07616660 NA coding downstream 122860 7604862 ~ 7616660 (+)
CI01000039_07673393_07690390 KLHL13 coding downstream 191391 7673393 ~ 7691259 (+)
CI01000039_07702176_07705973 NA coding downstream 220174 7702176 ~ 7706101 (+)
CI01000039_07723565_07724142 NA coding downstream 241563 7723565 ~ 7724756 (+)
G181962 NA non-coding upstream 79338 7400581 ~ 7402300 (+)
G182014 NA non-coding upstream 81241 7400166 ~ 7400397 (+)
G182004 NA non-coding upstream 97329 7383566 ~ 7384309 (+)
G182000 NA non-coding upstream 131433 7349972 ~ 7350205 (+)
G181999 NA non-coding upstream 134436 7346805 ~ 7347202 (+)
G182063 NA non-coding downstream 3093 7485095 ~ 7485424 (+)
G182054 NA non-coding downstream 27590 7509592 ~ 7511146 (+)
G182051 NA non-coding downstream 33294 7515296 ~ 7515637 (+)
G182048 NA non-coding downstream 37024 7519026 ~ 7526562 (+)
G182091 NA non-coding downstream 59309 7541311 ~ 7572931 (+)
CI01000039_07324920_07329407 NA other upstream 156941 7324596 ~ 7329472 (+)
CI01000039_04829464_04847182 ZFR other upstream 2633075 4829413 ~ 4848563 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 3256981 4223868 ~ 4224657 (+)
G180156 NA other upstream 3390030 4090998 ~ 4091608 (+)
G180149 NA other upstream 3402075 4079419 ~ 4079563 (+)
CI01000039_07898330_07904918 DPF2 other downstream 413874 7896773 ~ 7905162 (+)

Expression


Co-expression Network