G182141


Basic Information

Item Value
gene id G182141
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7778628 ~ 7778831 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU206849
CATTTTCTGTGGGAGCCATACAATTTACTGGTGACTTAATTTAAAAAAAAAAAAAAACTGTTCTATTGCGCTTCTGATTTGGCAGTGAAATTCGCCGATTTTGGGTGCGTAAGATATGAAGGATTCTATGGTCCAGTTAGTATTTTCACCCCATAATGGCGGCCGCGCTACCAGAGCGCCATCTAGTGGCTGTTACCTAAAAAG

Function

NR:

description
PREDICTED: contactin-associated protein-like 4, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206849 True 204 lncRNA 0.41 1 7778628 7778831

Neighbor

gene id symbol gene type direction distance location
CI01000039_07738530_07773662 LTBP3 coding upstream 4062 7737196 ~ 7774566 (+)
CI01000039_07729075_07732016 NA coding upstream 46590 7729075 ~ 7732038 (+)
CI01000039_07723565_07724142 NA coding upstream 53872 7723565 ~ 7724756 (+)
CI01000039_07702176_07705973 NA coding upstream 72527 7702176 ~ 7706101 (+)
CI01000039_07673393_07690390 KLHL13 coding upstream 87369 7673393 ~ 7691259 (+)
CI01000039_07819978_07868788 NA coding downstream 41147 7819978 ~ 7868788 (+)
CI01000039_07884248_07885003 CDC42EP2 coding downstream 105218 7884049 ~ 7885934 (+)
CI01000039_07898330_07904918 DPF2 coding downstream 117942 7896773 ~ 7905162 (+)
CI01000039_07936605_07947802 MYO1CA coding downstream 157774 7936605 ~ 7947802 (+)
CI01000039_07962128_07963720 EPD coding downstream 183235 7962066 ~ 7963770 (+)
G182091 NA non-coding upstream 205697 7541311 ~ 7572931 (+)
G182048 NA non-coding upstream 252066 7519026 ~ 7526562 (+)
G182051 NA non-coding upstream 262991 7515296 ~ 7515637 (+)
G182054 NA non-coding upstream 267482 7509592 ~ 7511146 (+)
G182063 NA non-coding upstream 293204 7485095 ~ 7485424 (+)
G182055 NA non-coding downstream 140894 7919725 ~ 7922591 (+)
G182065 NA non-coding downstream 144223 7923054 ~ 7927686 (+)
G182184 NA non-coding downstream 201577 7980408 ~ 7980666 (+)
G182185 NA non-coding downstream 202613 7981444 ~ 7981994 (+)
G182194 NA non-coding downstream 295506 8074337 ~ 8074541 (+)
CI01000039_07324920_07329407 NA other upstream 453931 7324596 ~ 7329472 (+)
CI01000039_04829464_04847182 ZFR other upstream 2930065 4829413 ~ 4848563 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 3553971 4223868 ~ 4224657 (+)
G180156 NA other upstream 3687020 4090998 ~ 4091608 (+)
G180149 NA other upstream 3699065 4079419 ~ 4079563 (+)

Expression


Co-expression Network