G182184


Basic Information

Item Value
gene id G182184
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7980408 ~ 7980666 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU206892
TCTTGCTAGGAAACAAAACCGACCGTCATTGAAATCTCATAGTGTGGATGGGGCAAAACGGAGATATTAAAAAACGAGAAGCATTTTCAAACGTAATGAAATTGTAATGTAATGCTTAAATGTAGCCTGAGATTTCACAACCAAATGTCATTGAAATGATATAATAGAACACACCAATCAGAAGATTTAATAAATAAATAAATTATCCTAAGTTGACACACAAAGACATCAAGAATCAGCACATGAATCTCAACAATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206892 True 259 lncRNA 0.33 1 7980408 7980666

Neighbor

gene id symbol gene type direction distance location
CI01000039_07972168_07974927 INS coding upstream 5386 7971946 ~ 7975022 (+)
CI01000039_07965528_07969798 PANX1B, PANX1 coding upstream 10496 7965528 ~ 7969912 (+)
CI01000039_07962128_07963720 EPD coding upstream 16638 7962066 ~ 7963770 (+)
CI01000039_07936605_07947802 MYO1CA coding upstream 32606 7936605 ~ 7947802 (+)
CI01000039_07898330_07904918 DPF2 coding upstream 75246 7896773 ~ 7905162 (+)
CI01000039_08014352_08018949 TMPRSS4B coding downstream 32940 8013606 ~ 8019115 (+)
CI01000039_08044880_08049054 PAFAH1B2 coding downstream 64214 8044880 ~ 8050028 (+)
CI01000039_08052093_08053571 APOA1A coding downstream 71149 8051815 ~ 8053710 (+)
CI01000039_08083646_08085318 NA coding downstream 102980 8083646 ~ 8086184 (+)
CI01000039_08113233_08115430 NA coding downstream 132567 8113233 ~ 8116142 (+)
G182065 NA non-coding upstream 52722 7923054 ~ 7927686 (+)
G182055 NA non-coding upstream 57817 7919725 ~ 7922591 (+)
G182141 NA non-coding upstream 201577 7778628 ~ 7778831 (+)
G182091 NA non-coding upstream 407477 7541311 ~ 7572931 (+)
G182048 NA non-coding upstream 453846 7519026 ~ 7526562 (+)
G182185 NA non-coding downstream 778 7981444 ~ 7981994 (+)
G182194 NA non-coding downstream 93671 8074337 ~ 8074541 (+)
G182195 NA non-coding downstream 94014 8074680 ~ 8075099 (+)
G182197 NA non-coding downstream 96171 8076837 ~ 8077042 (+)
G182203 NA non-coding downstream 108166 8088832 ~ 8089206 (+)
CI01000039_07324920_07329407 NA other upstream 655711 7324596 ~ 7329472 (+)
CI01000039_04829464_04847182 ZFR other upstream 3131845 4829413 ~ 4848563 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 3755751 4223868 ~ 4224657 (+)
G180156 NA other upstream 3888800 4090998 ~ 4091608 (+)

Expression


Co-expression Network