G182185


Basic Information

Item Value
gene id G182185
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 7981444 ~ 7981994 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU206893
ACTTGTCTCCCTGGGTGTCATCAGCGCCATTAAAGACAATTTTTTAAGCGTGCTCGAGCTCCTCGCCCCTGGGAGAGCACGCGTAAACCGGGTGCCAGTCCGTGCCGGAGACCGGATGCTGCTCCGAGGCACAACGAAAGCAGCAGACACGTAAAATCCTTCGCGAGAATTGCGTTGCGCGTACGCAATCCAATCCCACGAAGGACTAGGCACAGACTCGCCGAGCGAAGCTTCACGAAGAAACTTGTCGACCGTTGGTATTGAGTCTTACCTTCTTCCGTCCTAAAGTTAGAGACACACACTGAGCTCGAGAGAGAATTCCAGCGTTATAAACAGGACTGCAGCTGAAGCCGCGAATATTTAGAACGCGTGCCATTGTGACGTCACTGAGATTGGCGTTGAATGCTGAGCTTCATCTCTTCATGAGGGAACTAACTGGTACAGTATATCTAAAAGCCAAGCCCTGTCAATAAAAATATGGCATTTTGCTGGACTTAGTTGATAAAAAAAACAATTTACTATAATATTTTCCTAATAACCTTGTGATAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206893 True 551 lncRNA 0.47 1 7981444 7981994

Neighbor

gene id symbol gene type direction distance location
CI01000039_07972168_07974927 INS coding upstream 6422 7971946 ~ 7975022 (+)
CI01000039_07965528_07969798 PANX1B, PANX1 coding upstream 11532 7965528 ~ 7969912 (+)
CI01000039_07962128_07963720 EPD coding upstream 17674 7962066 ~ 7963770 (+)
CI01000039_07936605_07947802 MYO1CA coding upstream 33642 7936605 ~ 7947802 (+)
CI01000039_07898330_07904918 DPF2 coding upstream 76282 7896773 ~ 7905162 (+)
CI01000039_08014352_08018949 TMPRSS4B coding downstream 31612 8013606 ~ 8019115 (+)
CI01000039_08044880_08049054 PAFAH1B2 coding downstream 62886 8044880 ~ 8050028 (+)
CI01000039_08052093_08053571 APOA1A coding downstream 69821 8051815 ~ 8053710 (+)
CI01000039_08083646_08085318 NA coding downstream 101652 8083646 ~ 8086184 (+)
CI01000039_08113233_08115430 NA coding downstream 131239 8113233 ~ 8116142 (+)
G182184 NA non-coding upstream 778 7980408 ~ 7980666 (+)
G182065 NA non-coding upstream 53758 7923054 ~ 7927686 (+)
G182055 NA non-coding upstream 58853 7919725 ~ 7922591 (+)
G182141 NA non-coding upstream 202613 7778628 ~ 7778831 (+)
G182091 NA non-coding upstream 408513 7541311 ~ 7572931 (+)
G182194 NA non-coding downstream 92343 8074337 ~ 8074541 (+)
G182195 NA non-coding downstream 92686 8074680 ~ 8075099 (+)
G182197 NA non-coding downstream 94843 8076837 ~ 8077042 (+)
G182203 NA non-coding downstream 106838 8088832 ~ 8089206 (+)
G182239 NA non-coding downstream 304979 8286973 ~ 8291456 (+)
CI01000039_07324920_07329407 NA other upstream 656747 7324596 ~ 7329472 (+)
CI01000039_04829464_04847182 ZFR other upstream 3132881 4829413 ~ 4848563 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other upstream 3756787 4223868 ~ 4224657 (+)
G180156 NA other upstream 3889836 4090998 ~ 4091608 (+)

Expression


Co-expression Network