CI01000040_00569008_00598590 (STK10)


Basic Information

Item Value
gene id CI01000040_00569008_00598590
gene name STK10
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 568760 ~ 598590 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000040_00569008_00598590.mRNA
ATAATGATCGAGTTTTGTGCTGGAGGTGCAGTCGATGCCACCATGTTAGAGCTGGACAAGGGTCTTCAAGAACCTCAGATCCGGGTGATCTGTAAACAGATGTTGGAGGCTCTTCAGTACCTCCACAGCATGAAGATCATCCACAGAGACCTAAAGGCTGGAAACATTCTCCTCACACTGGATGGAGACATCAAGCTAGCGGATTTTGGAGTTTCTGCAAAAAACACCAAAACTCTCCAAAGGCGAGACTCTTTCATTGGGACTCCATATTGGATGGCTCCAGAGGTTGTGATGTGTGAGACCATGAAGGACGCTCCATACGACTATAAAGCTGACATCTGGTCACTGGGCATCACGCTGATAGAGCTGGCTCAGATAGAGCCGCCCCACCATGAGCTGAACCCCATGAGGGTCCTGCTAAAAATTGCCAAGTCTGACCCACCCACCCTGGAACAGCCTGCCAAGTGGTCAATGGAATTTAACGATTTCCTGAAAAAAGCATTGGACAGAAACCCCGAGATGAGGCCAACGGCTGCTCAGCTTCTAGAACATCCTTTCGTGAGTTCAGTGAAGACCAACCGTCCAGTGAGAGAGCTGGTGGCAGAGGCCAAAGCTGAGGTGATGGAGGAGATCGAGGACAATCATGAAGAAGGAGAAGACGAAGACCCTGCTGATCTCACTCCTGCTCCGGTCAAAGACCCATCAGAAACCAGTGAGACCAGTTTATATGGAGACAATCCCCAAGACACACCTCACACGGTGATTGAGGAGGAGCTCAGGACCCTCGTGCCCACCGAAACTCCTTTGAAAGAGCAGGAGGACAATCTCAGCGAGTTTCCAGAGGAAGATCATGACAAACCTGAGAGCGAGGCATCAGGCAAGGCTTCCAGCTCCGACTCCGGCATTGAGGATGGAAAAAGCACGCCCACCTCTGAAGAGGACACCAAAGTGGTCGAGAGCTCTGAACCAGAGCTTCCTTTACTGAGGACAGCAGATCCTTCAGAGTCATCAGAATCTTCTTCAGACACCATGGAGCAGCCCTCAGCGGTGTCAGAGAAACCACAGAAACCGGAGAAAGAAGCCCACAGTGGAGTAATGCCTAACCAGCAACCAGATACCATGCTGGACCAAACTGAGTCCAAAGAGCCGGCCAATCGTGTGTCTGTGGCGAGCGACAGGTCCTCTTTGGGTGGTGAGGATGTGGAAAGTTTGGTTCCTCACACAAATGGCAGATTATCAAAACGATACTCTGATGTGGGCAGTGAAAACATGGACATCAGCCTAAACATGTCAGGTCATATGTCTGTCAACAAGGACTTGGGTACCATCACTTTATGGGACTCCAAGAAGACGCTCAAACGCACCCGTAAGTTCTTGGTTGATGGTGTTGAGGTGAGCATCACCACCTCCAAAATCATCACTGATGATGAGAAGAAAGATGAGGAAATGAGGCGTCAGGAGCTTCGAGATCTGCGTCTGCTGCAGAAAGAGCAGCATCGCGCTCAGGCCGTGCTCAACTTGAAGCTGAAAGATCAGCGGGAACAGATACAGCGCAGATTCGACCAGGAGATGAATGCCAAGAAAAAATACTTCGACACGGAGCTGGAGACCCTGGAGAAACAGCAGAAACAGACCATAGAGAGAATGGAGATGGAGCACACCGTACGGCTGCGGGACGAGGGTAAACGCATTCGTGCTGAACAAGAAAAAGCCTACAACAAGTTCATAGACCAGATGAAACACAAGAAGAAAGAGGTCAAACAAGAAGTGGAGAAACTGCCCAGGAGTCAGAGGAAAGACAGTTTGAAGGTCAAAATGAGCGACTTTCAACAGATGAAATCAAATGAGGAAGAGAAGTTCCTTGCAGATCAGAGGGATTATCTTGACTCGACTCTGAAGAGGATCATTTCTGAAAATAAGCGGGAAATCTCAGAGACGGAGCGTCAGTGCCTCCTCAAAAAACAAGCTTTGCTTAGAGACCGAGAGTCAACTATTTGGGACATGGAAGAGAAGAACTTGCACGAGAGACACCAGCTCCTCAAACAGCAGCTGAAGGACCAGTATTTCCTGCAGAGACACCAGCTCCTCAAGAAACACGAGAAGGAACAGGAGCAGATGCAGTGCTACAACCAGCGCATGATTGAGCTCCTCAAAGTTCGACAGCAGCAGGAGAAGAACAGGCTGCCTAAGATCCAGCGCAGCGAAGGCAAAACACGAATGGTCATGTTCAAGAAGAGCCTAAAAATTAACTCCTCCGGAAACTCAGCGGAAGACCGTGAAAAGATCAAGCAGTTCACCAGGCTGGAGGAGAAGAGGCAGAAGACCGAGCGATTGCACCAGCAGCAGAAACATGAGAACCAGATGAGGGAGATGATTAACCAGTGTGAGGGGAACAGCAGAGAACTGCAGCAGCTGCAGAATGAGAAATGTCACCTGCTAATAGAAAACGAAACGCAGCGTCTGAAGCAACTGGATGAGCAACACAACCAGCAGCTGAAGGAGTGGAGAGAACACCTCAAGCCCAGGAAGAAGGTTCTGGAGGATGAACTGACCATGAGGAAGAAAGAGCAGGAGCTTTTCTTCAGGATGAGCGAAGATTCCGAGTGTCTGAACGTCGGCTCACCGAACAAACTCACCAAGTTCCTTCCATACGTCGATTCCTCCACCACATGAGCTCCTGCATCAGACTCACGTCGAGCTCCACACCAAGTATTTTAGCTTTTGATGAATATATTTAGACGAAGGGATTTTGTATCATGAACCGTGGCACTAGAACAACTAGTTCATTTTCCACTCACTTCTGACGGACTTAAAAGCTACTGTTGTAATTTTATCTTCAAGTTAGCAAAAAGTGTATTGCCAAACATTGTACAAACCTTGCATATTCTTATATATTTTTATTTTTTTCTATGATCATTAAA

Function

symbol description
stk10 Predicted to enable protein homodimerization activity and protein serine/threonine kinase activity. Predicted to be involved in protein autophosphorylation and regulation of lymphocyte migration. Predicted to act upstream of or within protein phosphopantetheinylation and protein phosphorylation. Predicted to be located in plasma membrane. Is expressed in several structures, including EVL; epidermis; hatching gland; mesoderm; and periderm. Orthologous to human STK10 (serine/threonine kinase 10).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000040_00569008_00598590.mRNA True 2921 mRNA 0.48 17 568760 598590

Neighbor

gene id symbol gene type direction distance location
CI01000040_00413047_00426023 NA coding downstream 141696 413005 ~ 427064 (-)
CI01000040_00153873_00173202 GABRA6B, GABRA6 coding downstream 395558 153873 ~ 173202 (-)
CI01000040_00081665_00111856 GABRA1 coding downstream 456566 80979 ~ 112194 (-)
CI01000040_00002763_00060396 GABRG2 coding downstream 508364 2763 ~ 60396 (-)
CI01000040_00623449_00625433 NA coding upstream 24833 623423 ~ 626036 (-)
CI01000040_00626750_00628543 NA coding upstream 27891 625832 ~ 628694 (-)
CI01000040_00701332_00746419 DPYSL3, DPYSL3.S, DPYL3 coding upstream 102243 700833 ~ 746964 (-)
CI01000040_00760116_00779888 JAKMIP2 coding upstream 161526 760116 ~ 780882 (-)
CI01000040_00795062_00809762 NA coding upstream 196347 794937 ~ 809762 (-)
G183881 NA non-coding downstream 3352 565186 ~ 565408 (-)
G183880 NA non-coding downstream 3614 564907 ~ 565146 (-)
G183879 NA non-coding downstream 3874 564654 ~ 564886 (-)
G183726 NA non-coding downstream 88103 480455 ~ 480657 (-)
G183725 NA non-coding downstream 88384 480155 ~ 480376 (-)
G183897 NA non-coding upstream 36389 634979 ~ 635312 (-)
G183906 NA non-coding upstream 48724 647314 ~ 647585 (-)
G183907 NA non-coding upstream 50052 648642 ~ 648923 (-)
G183908 NA non-coding upstream 52317 650907 ~ 651159 (-)
G183913 NA non-coding upstream 61760 660350 ~ 661056 (-)
G183474 NA other downstream 518034 46627 ~ 50726 (-)
G183972 NA other upstream 234550 833140 ~ 833541 (-)
CI01000040_02595281_02596387 FGF1B other upstream 1996656 2594895 ~ 2596728 (-)
G185593 NA other upstream 2393598 2992188 ~ 2992683 (-)
G185681 NA other upstream 2745885 3344475 ~ 3344880 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_019842 stk10 coding NC_007132.7 CM002905.2 42785516 ~ 42831033 (-)