CI01000040_00623449_00625433



Basic Information


Item Value
gene id CI01000040_00623449_00625433
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 623423 ~ 626036 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000040_00623449_00625433.mRNA
ATATGCCATAATGACGTGTTTTCTATTCTAAATAAATAAAAAAAACATTTTCCACAAATTCACCACAAGGTGGGGGATGTGTGCAGCAGTTGTTGTTGTTGTTTATCAATAGCCTACTGTTCTTTTTTTCTGTGCGTCTTGACTAGATTATTATAATAACATTATTAAATACAAAGATTAAGATGAAATAAATTCATAAAAAACATCAAAAATCGTTTGTTGTAATCACTTGTTGCTTTATGATGAACTTTAAAAACTACAACTCCCATAATCGCGTGCAGTGGGCGTGGCTCTGTGCCTCACTCACAACAGCAGTGCGTGAACAGGTGAACACGAGTGTTTCTCTCGCTTCTGACGGTGGATGTTTTCTCATGGATGAAGTGGAAGAAGTCTCTTACATTTTAAAGTTATTATATTTTTTTCCTAAGTGATGAAGATGTCTGTTTTCCGTGGAGTGCCGGATAATTTTCAGCCCAGACGCTTTTGTTTTTTCTGAAGTCAACTAATTCATCATCTACAACTACATCATCTGTTTTATTTTTTTATTTTTTTTTTTTTTATTTTTTTTGTTTTAGCATTTGAGCGGACCTCTATTATTTTAAAATGGCTTTTGCAAAATTCAGCAAGATGATCAGATTTCCTGCGATTGACATCAAGAAGAAAACCAAGCAGTATGAGCACGTTCACCGGGATGTAAATCCGAACGACATGTGGGAAATTATCGGAGAACTGGGCGATGGTGCTTTCGGTAAAGTTTATAAGAGTGTTGTGAACTCTAGGACATTTCAAGCGGTCACTGTAACCCTCTTACCAGGTTGACTGGGGTTAAATACAACCTCAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000040_00623449_00625433.mRNA True 845 mRNA 0.36 2 623423 626036

Neighbor


gene id symbol gene type direction distance location
CI01000040_00569008_00598590 STK10 coding downstream 24833 568760 ~ 598590 (-)
CI01000040_00413047_00426023 NA coding downstream 196359 413005 ~ 427064 (-)
CI01000040_00153873_00173202 GABRA6B, GABRA6 coding downstream 450221 153873 ~ 173202 (-)
CI01000040_00081665_00111856 GABRA1 coding downstream 511229 80979 ~ 112194 (-)
CI01000040_00002763_00060396 GABRG2 coding downstream 563027 2763 ~ 60396 (-)
CI01000040_00626750_00628543 NA coding upstream 445 625832 ~ 628694 (-)
CI01000040_00701332_00746419 DPYSL3, DPYSL3.S, DPYL3 coding upstream 74797 700833 ~ 746964 (-)
CI01000040_00760116_00779888 JAKMIP2 coding upstream 134080 760116 ~ 780882 (-)
CI01000040_00795062_00809762 NA coding upstream 168901 794937 ~ 809762 (-)
CI01000040_00810717_00829640 P4HA2 coding upstream 184373 810409 ~ 829640 (-)
G183881 NA non-coding downstream 58015 565186 ~ 565408 (-)
G183880 NA non-coding downstream 58277 564907 ~ 565146 (-)
G183879 NA non-coding downstream 58537 564654 ~ 564886 (-)
G183726 NA non-coding downstream 142766 480455 ~ 480657 (-)
G183725 NA non-coding downstream 143047 480155 ~ 480376 (-)
G183897 NA non-coding upstream 8943 634979 ~ 635312 (-)
G183906 NA non-coding upstream 21278 647314 ~ 647585 (-)
G183907 NA non-coding upstream 22606 648642 ~ 648923 (-)
G183908 NA non-coding upstream 24871 650907 ~ 651159 (-)
G183913 NA non-coding upstream 34314 660350 ~ 661056 (-)
G183474 NA other downstream 572697 46627 ~ 50726 (-)
G183972 NA other upstream 207104 833140 ~ 833541 (-)
CI01000040_02595281_02596387 FGF1B other upstream 1969210 2594895 ~ 2596728 (-)
G185593 NA other upstream 2366152 2992188 ~ 2992683 (-)
G185681 NA other upstream 2718439 3344475 ~ 3344880 (-)
G187207 NA other upstream 4638157 5264193 ~ 5286918 (-)

Expression



Co-expression Network