CI01000040_00849226_00851895


Basic Information

Item Value
gene id CI01000040_00849226_00851895
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 849226 ~ 851915 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000040_00849226_00851895.mRNA
AGGCATATGGAATTGCCAGAGGAAATCCAGTCGTGGGTGCATGACTATTATTACTATCTTTGGTACCACCACAAGGGTCGCGTCATTCAAGGACTCTTGGATGATCTCCCGTTTGTCCTGCATTCAGATGTTTCAAGTTGTTGTCACAAATCTCTGTTTAAAAAAGCCAAGATGTTCAGAGACACAGAACATGGCTTTAAAAGGGCTTTGTCGCTGAGATTTAAAACCTACATGTACAGTCCTGGACAAGTTCTGGCTAAAACTGGAGAAATTAATCAAAATCTGTATTACATTAAGCATGGACTTCTACAGGTTCTTTGTATGGATTCTGGGAATGAGATTGCAAAATTACTACCTGGCACATTGTTTGGAGAGACCCATTTGGTGTACAATATCCCTAGAAATGTTACAGTGCGAACACTAACATTGTGTGAAATTACCGTTTTGAAACATAAGGAATTGCTTTCACTCTTTGCTGACTACCCTGAAGCTGGTGCTAAGATTGTCAGAACTCCCAAGACACGTATTCAAAATTTCAAGCGTCCTCTACGAGAAGCATGTGGAGTTGCCTGCCTCCCCAAAAATGTTGCATTTGAAAAGAAGGAGGGCATGAAACTTAAGACAAGGGATAGGAGGATTTTTGCCGCGTCCTTGGAACATGTTTCAAACCAGCCTCCTCAAGTTGAGATATTTTGGAAGAGAACTTTCCAGCCTGACAGTGCTTTTGTAAAGTCCTGGAAGGTCTTTTTTTTCTGGTGCATCACTGTTTCAGTTTTCCTGAAGACTTGGGTGTTTTTTTTCACCAACAGTGCAGACCTAAAGGGGCTCTTCAGTGGAGGCTGGTCTGTCTATTACCTTTCAGTTGATGGCCTGGTTAACATTGCTGCTGTATTTGACATCCTGGTGAATCTCCGCACTAGTGTGTTTACAGAAGATGGTACTGTTTAATTTACATGTTCATTTTTGTA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000040_00849226_00851895.mRNA True 968 mRNA 0.41 8 849226 851915

Neighbor

gene id symbol gene type direction distance location
CI01000040_00839831_00841736 NA coding upstream 7490 839831 ~ 841736 (+)
CI01000040_00643738_00689792 STK32B, STK32A coding upstream 159308 643738 ~ 689918 (+)
CI01000040_00554753_00561571 NA coding upstream 286233 554753 ~ 562993 (+)
CI01000040_00512880_00513451 NA coding upstream 335629 512880 ~ 513597 (+)
CI01000040_00366809_00384965 NA coding upstream 463967 366709 ~ 385259 (+)
CI01000040_00863147_00874526 NA coding downstream 11232 863147 ~ 874546 (+)
CI01000040_00879146_00889251 NA coding downstream 27231 879146 ~ 889483 (+)
CI01000040_00895179_00895620 NA coding downstream 43264 895179 ~ 895649 (+)
CI01000040_00908325_00928762 OATX coding downstream 55972 907887 ~ 928826 (+)
CI01000040_00941839_00959939 NA coding downstream 89924 941839 ~ 960054 (+)
G183981 NA non-coding upstream 7140 841742 ~ 842086 (+)
G183971 NA non-coding upstream 15695 833145 ~ 833531 (+)
G183970 NA non-coding upstream 16370 832305 ~ 832856 (+)
G183849 NA non-coding upstream 25891 821106 ~ 823335 (+)
G183847 NA non-coding upstream 39203 809765 ~ 810023 (+)
G184048 NA non-coding downstream 36164 888079 ~ 931141 (+)
G184061 NA non-coding downstream 109174 961089 ~ 964946 (+)
G184062 NA non-coding downstream 118850 970765 ~ 971574 (+)
G184077 NA non-coding downstream 223728 1075643 ~ 1121547 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 572371 240849 ~ 313275 (+)
G183420 NA other upstream 684304 157543 ~ 164922 (+)
G183366 NA other upstream 788829 53691 ~ 60397 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other downstream 122198 977184 ~ 978163 (+)
G184003 NA other downstream 378377 1230292 ~ 1236489 (+)
G185296 NA other downstream 2481663 3333578 ~ 3333983 (+)
G185884 NA other downstream 2887072 3738987 ~ 3739281 (+)
G185947 NA other downstream 3121850 3973765 ~ 3974123 (+)

Expression


Co-expression Network