CI01000040_01160713_01185710 (HSPA4A, HSPA4)


Basic Information

Item Value
gene id CI01000040_01160713_01185710
gene name HSPA4A, HSPA4
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 1160075 ~ 1186329 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000040_01160713_01185710.mRNA
AAATGCAAAATGCAAGAAAGACATGGTGGTTCAATGATGGAATAAGTGTTATTATGACTGAACAGTAGATCTGCCCTAAAATTAAGCCTACATGAAGTAAGCACTATGATACATCAGCAAACATGTCTGAATAAAGAATTTAAAACAAGAATACTGACAACTGTCAAGCTGAAAATCTTAAAAATATCACTTGTTTTCTTTTGCTCTTTAGTTAATCCCAATTAAAATGTCTAAATTACAACCAAATGTGCGAAGTATTCTCAACTGTAACTAGTCTGAACCGAACTGAACTCGCCAAGCAACTGCCATTTTGACCGTGTTTACATTTTGTCAAGTTGGTGACGCAAAGATACTTCAGCGGAGGGTGAAACATTTTTACGTCGTGACGTCCGTCGGCATAACGTCACAATTTTATATTATATATATATATATATATATATATAAAAAAAATTAAAAAAAGCAGTTGAGCTCCTGAAACGATCAGTAATGTGTTTACGTGACTCTCCCATTAGCATTTAACGATGTGTGGAAGTTAAAACTCAAACGCCAACTGAATTTGAACGTCGTTTAATTATCTATCAGCAGAAATGTCCACTTCTAGTAATTAACGTGCCAAAAAATGGCATTAAATATGAACTCTGCATCTGAAAGCGCTAGACATGAGGGGGGCCCGAAGCATTCTAGCTATGAAAGCCTTTTCCCTTTGTCTCTGTCCGCTTCCACACTGATCTGCTGTAGCGTCCCAATAAATGTGTCACCCACCAGCGAGAAACACGTAACTGCTCTAAAAGACACAGCTCGTTTAGACGAGGATGAAGAGCTGGAGGAGTCGCTGCTGTCTGAGGAAGAGTCGCTGGAAGAGCTCGACGAATCACTGCTGCTGGAGCTGGAGGAGGACCTCAAAGAAAACAGCATGTCTAAAACGGGTAAAGAAATGAAGATGTCAGTGGTGGGATTTGATGTGGGCTTCCAGAGCTGTTATGTTGCTGTCGCTCGCGCCGGTGGAATAGAGACAGTAGCGAACGAATACAGCGACCGATGTACACCGTCATTTGTATCATTTGGTCCTCGGAATCGTTCGATTGGGGCAGCCGCCAAAAGCCAGGTGGTCACAAACTGCAAGAACACTGTGCAGGGTTTTAAGCGATTCCATGGCAGGGCGTTCAGTGACCCTTATATCCAGGCGGCAAAGTCCGGCCTGGTCTATGATCTTGCTCAGATGCCGACTGGAACCACTGGCATTAAGGTCATGTATATGGAGGAAGAGAAGGTGTTCGGCATTGAGCAGGTCACTGCCATGCTGCTGACCAAACTGAAAGAGACCGCTGAAGCTGCACTCAAAAAACCTGTGGCAGACTGTGTCATCTCTGTCCCCAGCTTCTTTACTGATTCCGAGAGAAGATCAGTCATTGATGCTGCACAGATCGCAGGCCTTAACTGTCTCAGACTCATGAACGACACTACAGCAGTTGCACTGGCATATGGGATCTACAAACAGGACCTGCCCGCTCCTGAGGAGAAGCCCAGGACTGTGGTGTTTGTGGATATTGGTCATGCTAGTTACCAGGTCTCCGCGTGTGCCTTTAACAAGGGGAAGTTGAAGGTTCTGGGTTCTGCGTTTGACCCTGAGCTGGGCGGTAAAGACTTCGATGAGGTGCTGGTCCAGTACTTTTGTGAGGACTTTGCTCAGAAGTACAAGCTGGACGTGCGATCGAAGCCCCGCGCTCTGGTGCGACTCTACCAGGAGTGCGAGAAGCTGAAAAAGCTCATGAGTGCAAACTCCTCCGACTTGCCGCTCAACATTGAATGCTTCATGAATGACATCGATGTCAGCAGCACACTCAACAGAGCCAAGTTCGAGGAGCTCTGTGCAGGGCTGTTGGCCAAGGTGGAGGGTCCTCTGCGCAGCATCATGGAACAGACCAGACTGAAGAAAGAGGACATCTATGCGGTGGAGATCATTGGCGGCGCCTCCAGGATTCCAGCCATCAAAGACAAAATCAGCAAATTCTTTGGGAAGGAGCTGAGCACGACGTTGAATGCAGATGAAGCTGTGGCCAGAGGATGTGCACTGCAGTGTGCAATCCTGTCGCCCGCCTTTAAAGTGCGTGAGTTTTCCATCACAGATGTGGTGCCGTACCCCGTCTCTCTGAAGTGGACCTCAGCAGCTGATGAAGGCATCGGTGATTGCGAAGTTTTCCCAAAGAACCATGCCGCACCATTCTCTAAAGTGTTGACTTTCTTCCGGAAGGAGCCCTTCACTTTGGAGGCCTACTACAGCAATCCAAAAGAGTTGCCGTATCCCGATCCTACCATAGGCCAGTTTAACGTCCAGAAGGTGGTTCCTCAGCCGTCAGGCGAGAGCTCCAAGGTGAAGGTGAAGGTACGTGTGAATGTACATGGGGTCTTCAGTGTGTCCAGCGCCTCTCTGGTGGAGGTCGTGAAAACTGCTGAGGGAGAAGAACCCATGGAGACGGACACTCCAGCCAAAGAGGATGAGCTCCTTTACACTCATGAAATGCAAAAACAAAGGTTTCTAAGGTTATCAAAATGTCAGTCATTGCGAGTTTGGAACAAGATGCACGTGGATCAAGAAGCACAAAAGGCTCAAGGTGATGAACAGAAAGAACAAGCTGAGAAGAAATCAGACACTGAAGACATGGAGACTTCACCAGAGGACAACAAACAAGAGAAGAAGAATGAGCCTCCACAGGCCAAGAAACCCAAAGTGAAAACAAAGACGGTGGATCTGCCCATCGAGAACAGTCTGCACTGGCAGCTGGCCAGCGACATGCTCAATCTGTTCATGGAGAATGAGGGGAAGATGATAATGCAAGACAAGCTGGAGAAGGAAAGGAACGATGCAAAGAACTGTGTGGAGGAGTATGTTTATGAAATGAGAGACAAACTGCATGGAGTGCTGGAGAACTTTGTCAGTGAGGCTGATCGAGATTCTTTCTCCTTAAAACTGGAGGACACTGAAAACTGGCTGTACGAAGAAGGAGAGGACCAACAGAAGCAAGTATACATTGATAAACTGGCTGAGTTGAAGGATGAGCTGTATGATCATCTGGATGAGCTGGAGGTCATGAAGGTGGAGAAGCAGGTGAACGAAGCCATGACCTGGATGAATAACAAAATGAACCTGCAGAGCAAACAGAGTCTCAGCCAGGACCCAGCCGTTAAAGCCCAAGAGATCCAGGCCAAAACGAAGGAGCTGTATTCTGCTTGCAATCATGTTGTCAGCAAACCTAAGCCCAAAGTGGAGCCTCCAAAAGAGGAGACACCAGCCGAACAGAACGGGCCTGTTAACGGACAGGAGGGTTCAGAGGATCAACCGGCCAGCCCAGAGAAGGGCCGAGCCGCCCCAGAAACCACAGAGGCCAAACTTCCTGAAATGGACATTGACTAACTTAGCTTGCCGCTCTTCTGTGTCCGCACCAGCCTCTCTTATACGCCTCTGAGTTCGGATTAAAAACACACAAAAAAAAAAAAAACATTACTCAATTCAGCAAATGTTCTCTTGCTCTTGGTGGCATGTTTCTTTCTGTTTCACAGGATACATAAAGATCCAATCTACTTTCTTTGTTTGTTTGTTTCTTCAACAAGGAAATAACATGTGACAGGTATAGGAAGAGAACCTGGTCTTTGTTGCTTTTTCCCCTGATGGGATTATAAAGTGAGATGGACTGGTTTAGTGCTGTTTAATGGATTTCGGTTCTATTTGGAGAGTTAATTGGCATTGAAGATTAGTTGCTTCACACGTGAGATTCTTGTTGAAAGTTTCCAACCACCGGGTGTTGGTGAAGATGCACTGAAACGGAGGAGGAAGAGCCTGAACATTCGCTGACAGAAGAGGCAATGAGCGTCACTGTATGTGGAAGTAGAGCTGAGTTACTGTTATGCAGTATTTCGTTGTGAGAGGTGCGTCATGGTGCTTTTGGGTTTAGCCATGTTTGTTTTACTTTTACTTTTTCTACTCTGCAACCTGTGGGAATGATGGAGACTAATTTGGTGTCCATCCAGTCATAAATGATAATTATAAATAAA

Function

symbol description
hspa4a Predicted to enable ATP binding activity. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including gut; head; liver; pectoral fin bud; and somite. Human ortholog(s) of this gene implicated in Chagas disease. Orthologous to human HSPA4 (heat shock protein family A (Hsp70) member 4).
hspa4 Predicted to enable ATP binding activity. Involved in chaperone-mediated protein complex assembly and protein insertion into mitochondrial outer membrane. Located in cytosol and extracellular exosome. Implicated in Chagas disease. Biomarker of chronic obstructive pulmonary disease; rheumatoid arthritis; type 2 diabetes mellitus; and ulcerative colitis.

GO:

id name namespace
GO:0005524 ATP binding molecular_function

KEGG:

id description
K09489 HSPA4; heat shock 70kDa protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000040_01160713_01185710.mRNA True 4050 mRNA 0.46 23 1160075 1186329

Neighbor

gene id symbol gene type direction distance location
CI01000040_01150384_01152552 SRA1 coding downstream 7523 1150035 ~ 1152552 (-)
CI01000040_01134768_01140438 SRA1 coding downstream 18959 1134419 ~ 1141116 (-)
CI01000040_01002406_01015284 NA coding downstream 144791 1000722 ~ 1015284 (-)
CI01000040_00961941_00973627 IK coding downstream 186448 961941 ~ 973627 (-)
CI01000040_00837863_00839807 NA coding downstream 320268 837463 ~ 839807 (-)
CI01000040_01287654_01288940 NA coding upstream 101316 1287645 ~ 1290193 (-)
CI01000040_01315704_01327557 NA coding upstream 128846 1315175 ~ 1327606 (-)
CI01000040_01354920_01371380 STK26 coding upstream 168522 1354851 ~ 1371380 (-)
CI01000040_01384014_01394577 T185L, TMEM185A, TMEM185A.L, TMEM185, TMEM185B coding upstream 197044 1383373 ~ 1394577 (-)
CI01000040_01396138_01397237 ANKRD46, ANKRD46A, ANKRD46B coding upstream 209204 1395533 ~ 1397237 (-)
G184497 NA non-coding downstream 11793 1128537 ~ 1148282 (-)
G184460 NA non-coding downstream 173853 985862 ~ 986222 (-)
G184445 NA non-coding downstream 205402 933428 ~ 954673 (-)
G184436 NA non-coding downstream 249064 908093 ~ 911011 (-)
G184430 NA non-coding downstream 262936 888626 ~ 897139 (-)
G184506 NA non-coding upstream 67862 1254191 ~ 1254738 (-)
G184573 NA non-coding upstream 95647 1281976 ~ 1284791 (-)
G184587 NA non-coding upstream 126584 1312913 ~ 1313434 (-)
G184651 NA non-coding upstream 376598 1562927 ~ 1582846 (-)
G184658 NA non-coding upstream 395126 1581455 ~ 1581991 (-)
G183972 NA other downstream 326534 833140 ~ 833541 (-)
G183474 NA other downstream 1109349 46627 ~ 50726 (-)
CI01000040_02595281_02596387 FGF1B other upstream 1408917 2594895 ~ 2596728 (-)
G185593 NA other upstream 1805859 2992188 ~ 2992683 (-)
G185681 NA other upstream 2158146 3344475 ~ 3344880 (-)
G187207 NA other upstream 4077864 5264193 ~ 5286918 (-)
G187348 NA other upstream 4376326 5562655 ~ 5565553 (-)

Expression


Co-expression Network