CI01000040_01287654_01288940


Basic Information

Item Value
gene id CI01000040_01287654_01288940
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 1287645 ~ 1290193 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000040_01287654_01288940.mRNA
AATCTTGCATACTACTGAAGTAGGAAATCTGTACTATAGACTGCATCAGTGTGTAGACTGTACTGTAAATAAAGATGTTCACTACAAACAGCATTCAAGAGACTGAGAAAAGACATTAAATACGTTAAACATGCCATTTTCGGTTCAACAGAAATGTAGAAATACACTATATTGCTAGAATAAGCTCACAAAGATATAATACACCTGATAGTAAACACACACATACAGTAAAGAAGTAAATAAACAGCGTTAGATTGCAGTGGTTAGTGTAGATAGAGTCCGTTGGGCTAAGCTAGAGAGTAACGTAGCGCTCGTGCTAGTCCTAATTCATTACAGACAAACCTGTAAAGACCGTGTACGTCCACCTAAGTGAAAACGGGTCTCCGGAAGTAAGAACTGACTTTAAAGGGTACTTACAGAAAATATGTCTACATCCGTGGCCGCCATGATGAGGAATGTCTGTGTTTGGATAAGGCGAAAGGGAGCTGCCTGCTTTCGTCTCACTCACCGTCCGCTGACACACACATACACACACAGCGGTTGGGCTGGAGAATTTACGAACGTTACTATGGTGAAGGCCTTGCTTATGAATTTAAATGACGCAATGTGACGTTCTGTTCTGATTGGCTGAAAGGCACGAGCGAGGAACGCTGAAAGGCTTGGCTTTTGAATATTAATTAGGTTACGTGACTTGAAGGATCAGAATGTTTACTTAGAAGCTCGAGATGGCGGAATTAATATTCATGAGACAATATTTTGCCATACTAGGATTCGTAATTTCGCAATATGGCTTCTTCCTGAAAACTCCCACTGGCTTCAGGAATGTCTTTTCTCAAGACATGGCAAGATAGAGCTTCTAAATAAAGAAATATGGAAGTAATTGTCAATTATGACATAACTGTACACATAACGTTCGTTCAAATACACTCACAGGGACAATTTGTTGATTTATTGAATTATGTTGTACTCATATGATTTTATTTTAAACCATTTAACAATTTAAAGGTAGCTAGCCAATATTTGGCTAGACTATGTCTTTTCTCCTTGACAAATTATGTTAAAATAAGCAAAACAAAATAATTTAGGAATCGGTTTTAAACTTTTCCACAGCCCCGCCCCCATCAACGTCTGATTTTTTTTACAAGAGGTCTAACGTGTTTCATTCCGGAAAACAGGTAAGGGCGTGGCGATCAGTCCAGGAGTAAACAGAGTCGTCCTGCTACAGTATGTTTATATCTAGGACGAGTTAAGAAATGGCTCTGACTCAAGAAGCGATTTTAAACACATTATTAGAAGGCAGAGGAAAGGTGAAAAACTCCGAGCTGCTGAGCAAGTTCAAAGATCGACTGAACTGCAGTGATCCGGCAGAGAAGAAGCAGAACCGAGATCTCTTCAAGACGTTTGTCAACAACGTTGGCGTTGTTAAAGAATTCCAGGATACCAAGTATATAGTCCTAAAGAAAGTATACCATCACCTACTTGAAGCCTCAAACAATGAGAACAAACAAAGAGAAGATAATGATCATGAAGGTGGATCACATCCAGAGGAAGATGAGAAGGAACAAAATGGAGAAGGTAAGAAGTCACTGAGCACTGAGGCTTCAGACGGCACCGCAGAACTTTCTCCCATAGAAGTTGCTTTGGAAAGAAGCAAGAATGTGGACTTTAAACCTAAAAAGTCTTTAAATTTCATTGTACCGCTTAAGTCTGACCCTGACTACTCTGATGACAAACATGGAGCGGCCAAGACAAACAAACCATTTGCGCTACCATTACGAATGCCCCAAACTGACATCAGCCAGCATCACAAGAAGAAGCTGTCCACTGCTGACTCTAAGAGAACGTCTATAGATGGTGTGACCCGCACTAGATACTTCAAGACCCCGAAACAGGCGGATGAGCCAAAGTACAACTCACACCATTGCCCGCTTGACCCCGCGGAGCACGAGTGGATGGTAAAGTCCGCGGCTGGACAGTGGAGTCAAGTGTACGGCCTTCTGTTGAAGGACGCTGAGCTCGCGGAGAAGAAAGACTTCATGTCTGGGTTCACGGCCCTACACTGGGCCGTCAAGTGTGGAAACATTGACATGGTCTGTATGATTATTGAGGTGTCTAGGAAGAACGGTCATGGGGTGGACGTTGACGCCAAGTCCAATGGCGGCTACACGCCACTACACATCGCCGCCATCCACAATCACGACTCTCTAATTGAACTTCTAGTCCAAAAGTATTGCGCCAATGGGAATCTAAGGGACAACTGCGGTAAGAAACCCTACCACTATCTGCGCAAAGGGGTTTCGAGACAGCTGAGGGAGCTTCTTGGAGACCCAAAAGCCGTCCAGCAGGAGGTTCATCAGGTCAGGGAGGACGGTGACCCGCATAGATACCCTAAAAGTCGTCTCTTCCCGACTCATCCGGTGGGGATCAAGAAAAAGAACAAGGGGAGAATCCAGTTCATGTCTTTGGCTGAAGACGTCAGAGCTGAGAGGGAAGAGCCGGCGTCGCATAAACAGAGGCTGGTGTCAGACGTCTTTCCATAACCGAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000040_01287654_01288940.mRNA True 2549 mRNA 0.44 1 1287645 1290193

Neighbor

gene id symbol gene type direction distance location
CI01000040_01160713_01185710 HSPA4A, HSPA4 coding downstream 101316 1160075 ~ 1186329 (-)
CI01000040_01150384_01152552 SRA1 coding downstream 135093 1150035 ~ 1152552 (-)
CI01000040_01134768_01140438 SRA1 coding downstream 146529 1134419 ~ 1141116 (-)
CI01000040_01002406_01015284 NA coding downstream 272361 1000722 ~ 1015284 (-)
CI01000040_00961941_00973627 IK coding downstream 314018 961941 ~ 973627 (-)
CI01000040_01315704_01327557 NA coding upstream 24982 1315175 ~ 1327606 (-)
CI01000040_01354920_01371380 STK26 coding upstream 64658 1354851 ~ 1371380 (-)
CI01000040_01384014_01394577 T185L, TMEM185A, TMEM185A.L, TMEM185, TMEM185B coding upstream 93180 1383373 ~ 1394577 (-)
CI01000040_01396138_01397237 ANKRD46, ANKRD46A, ANKRD46B coding upstream 105340 1395533 ~ 1397237 (-)
CI01000040_01418438_01423899 IRS4, IRS4A coding upstream 127859 1418052 ~ 1423899 (-)
G184573 NA non-coding downstream 2854 1281976 ~ 1284791 (-)
G184506 NA non-coding downstream 32907 1254191 ~ 1254738 (-)
G184497 NA non-coding downstream 139363 1128537 ~ 1148282 (-)
G184460 NA non-coding downstream 301423 985862 ~ 986222 (-)
G184445 NA non-coding downstream 332972 933428 ~ 954673 (-)
G184587 NA non-coding upstream 22720 1312913 ~ 1313434 (-)
G184651 NA non-coding upstream 272734 1562927 ~ 1582846 (-)
G184658 NA non-coding upstream 291262 1581455 ~ 1581991 (-)
G184664 NA non-coding upstream 311627 1601820 ~ 1602075 (-)
G184626 NA non-coding upstream 313929 1604122 ~ 1614037 (-)
G183972 NA other downstream 454104 833140 ~ 833541 (-)
G183474 NA other downstream 1236919 46627 ~ 50726 (-)
CI01000040_02595281_02596387 FGF1B other upstream 1305053 2594895 ~ 2596728 (-)
G185593 NA other upstream 1701995 2992188 ~ 2992683 (-)
G185681 NA other upstream 2054282 3344475 ~ 3344880 (-)
G187207 NA other upstream 3974000 5264193 ~ 5286918 (-)
G187348 NA other upstream 4272462 5562655 ~ 5565553 (-)

Expression


Co-expression Network