CI01000040_01418438_01423899 (IRS4, IRS4A)


Basic Information

Item Value
gene id CI01000040_01418438_01423899
gene name IRS4, IRS4A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 1418052 ~ 1423899 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000040_01418438_01423899.mRNA
GTCAGAGGTGCCTAAAGACTTCAAGAGGCTCCTGAAGAAACCACAGAGGAGGTACCATCCGCCTTACCACTTTAAAGTGCATCATCTGTTCCCAGATGAGAGCCCTCAGGATGCTGTATTGAGGAAAAACTTGCCACCCCTCCAGTATAAGGTGCACGACTCTGCCTTCTGCCGCGTACTCAGCGCCGACACCACTGCTGCTGCCCTGGCCGCCGCCGCCGCCTGCTCTGGTGGCGTGGACAGGGACATATGGAAATGTGGCTATCTCCGAAAACAGAAACATGGCCACAAGAGGTTCTTTGTCCTGAGGGGCCCCAGCAACCTCGGGCCCAGTCGGTTGGAGTACTATGACAGCGAGAAAAAATTTCGAAATGCCCTCAAAGCTGCTGCCTCCGGTGTTGCGTGCCCTGCCAAAAGGGTGATTTATCTGTCCCAGTGTTTTACGGTCAACAAGAGGGCTGATGCCAAGAACAAATACCTCATTGCCCTTTATACTAAAGATGAGTACTTTGCAGTGGTGGCGGAGAGCGAACAGGAGCAAGAGGAGTGGTACTTATCCCTCACTGAACTTATGACGGAGGGAAAAAAGGGGCAGCTAGACAACGACGAACTTGACGACGGTTACGGGACGATTTCGCCGGGCACTATTTTCAAAGAGGTGTGGCAGGTGAACGTCAAACCTAAAGGCTTGGGTCAGACCAGAAATTTAATGGGCGTGTACCGTCTGTGCCTTTCCGCCAAGACTATTCACCTGGTGAAGCTGAACTCGGAGACGCCTGCCGTCAACCTGCCGCTAATGAACATTCGCCGCTGCGGCCACTCTGAGAGCTTCTTCTTTATCGAGGTGGGCCGCTCTTCTTCCATTGGCCCTGGTGAAATATGGGTGCAAGTCGAGGACTCTGTGGTAGCGCAGAACATGCATGAGACCATTCTGGACACTATGAAGGCTCTGAAGGCCTTTCCTGACTTTAGGCCGCGGAGCAAAAGCCAGTCCTCCAGCTCAAATCCCATGCCGTTTATAACTACTCGTCGGCATCTCGGTAACCTTCCCCCAAGCCAAACTGGTCTGCAGCGCCCCTCCAGAACAGATTCAGTGACGGGCACGCCACCGACAGGGAAAAACCGAGGGCGAGGCCAGCGCTACCGGACGTCCAGTGAGGGCGAAGGCACTCAAGACCGGCCCCTGAGCTCCGGCACGGGCAGCCTGGTGCACCTAAATACCCCCATTCTCAGCGTGGGCCGAGAAGAAAGTGGCAGCTGCTGCAACCACGCCTCACCCAGTTCAAGTCACCACACCCGCTCTGCTTCACTTCCTGTGTCTCACTTCCTGTCTGCCACCAGCCCCATCAGTGTGTCCAGCAGCAGTGGGCATGGCTCGGCCTCTGACACGCACACTCGCCCCTCTAGCTCCTCCATTTGTGGCTCCCCTAGTGACGGAGGCTTCAACTCCTCTGACGAATTCTGCCCTAGCCCGTGCGACTTCAGGTACTTTCACGCAAGTTGTACCACACCCGAATCCCACGGCAGCACCCCACCGATTAGGGAAGACTATCGGCTGACTGAATACATGACCATGGATTGGCATAGAGATGGAGCGAGGACTTTTGAGGAGGAAAGCAGTTACATGGAGAGGACTTTCCTCAAGCTAGCACATTCATCAAAGCCAAAACTGGGTGGCAGCTTGAGTATCACGCAGCAGAAAGCTACGCAAACCTCATCTTCTTTAGATGAATCGAGCCCGGTGGAGTCAAAACGACACCAGGTTTGCTCGTGCCTGCTGAAGTCAGCCTATAAGTCTTACTCTGAATTACATCACCCAAACAAGCCTCCCTTGCTCAGCTCTGAGTGTCAAAAGAAACTGCCAAAAGACGATGGCTACATGCCCATGATTTACAGCATTGCTCCCTCTCCCAATGCAGATTACACCCCTATGCATCCCAGAGCAACCCTGGACATTCACCCCTGTTCCTCGCAGCAAGCGGACCGATACGGCTACATGATGATGCTCCCGGGCGACAGCCCGTCCAGCAGAGAGCAGGCGGAGTATGACGACTACATGGACATGTCACAACTTACCGTGGCCGAAGGCTTTTCCCAGTCCTCACCTGAAGGCCCAAAAGCCTCATACTTCTCTCTCCCACGCTCCTACAAAGCCCCGTCACGAGAGAAGCACGAAAAGATGGACTACGTTCCCATGTCCCCACCCGAGCCCCCAAGCCCACCTAGTCCCGGAGAATACATTCACATGGACTTCGGGTCCCGTCCCTCTCACCCCTCCGTAGACTCGCCCTCCACTCCGCCACCATCTCAGCCCTGCTATCAGCTGTGTTGCTCCTCACCAGATCATGACTACTTGGGCCTGAACATGGACAGCCTTCTGAAGGACCGGCCTCCTCGTCACTCGCTCGTAGCCCCATGGAACCCCCCCAATTACGCCCGTCCCCTAGGGTGCTCTTACGGACAGGCGTCGGCTAATTTGGATCCCGAGAAGACGCATAACGGATGTGGCGACAGTCCCTTGAGAATGATGCAACACCTTTGCATCTCAGAACAGCTGCCGTTCGTTCATACGGAGCCCAAGGTCATCAGGGCGGACCCACAGGGAAGGAGACGACACAGTTCAGAGACTTTTATCCCCTCGCCTGCTTCTTTTGCTAGTGGTTGCGGAATCAGGCCCTCAGCCAATCAGAATCTCCCCGAAGCTAGCAGATGGCAAAACTCCACCTCCTTCGATAGCATGTGGTCACACTCGGACGCCTCTCCCGACTCGGCAACCCCAGCGACGAGCGCTGCTACCAGAGGGGCGACTCAGAACACCTCATCCAGCTACCTCAACTACATCGCTCTGGACCTGAGAGAAGTGCCCCGTGACACTCCCCCTCCACACACGGCTCATAGCAACCTCCAAGAGAGCGATGCTTACGCTGGTATAGACTTCTCCGTTTCGGGAGGACGTGCCACTGCCTCAAAAGGTTGGTTGCATCTCTGTCTCCCATTATGCTACAAGTGACAGCAAGTAAAGGCTGCATGCTGCGTCAACATTCATTTGTCTGTCCAGTGTGAATGCAAACCATTAAGACAAGAGTTCCAAATGTGATGTAAAGTAACGTAAACAGTCTTATTTGTTAAGAAGCAGTTGTGAATTGCACCTCTTTTCACAGTTTTTTAAATCAAATAAGTCTTTCCTACAGTCCTGAGGAGAGACGATGGAGCAGAACTGTTGTTATAGTGAAAAATATTGCTGTTGCTTTCAAAGACATTCTTTTTCTTATTTATTTTTGGAACTGAACATGATTTGAAATTTGGTTTTGCACTTTGAATAGCACTGGGTAAAGAGCACTTCATGACTGTACAAAATACAAACACAGAGTTGTGATGTGCAAGTATGATATTAAA

Function

symbol description
irs4a Predicted to enable insulin receptor binding activity and phosphatidylinositol 3-kinase binding activity. Predicted to be involved in insulin receptor signaling pathway. Predicted to be active in cytosol and plasma membrane. Human ortholog(s) of this gene implicated in congenital nongoitrous hypothyroidism 9. Orthologous to human IRS4 (insulin receptor substrate 4).
irs4 Predicted to enable insulin receptor binding activity and phosphatidylinositol 3-kinase binding activity. Predicted to be involved in insulin receptor signaling pathway. Predicted to be active in cytosol and plasma membrane. Implicated in congenital nongoitrous hypothyroidism 9.

GO:

id name namespace
GO:0008286 insulin receptor signaling pathway biological_process

KEGG:

id description
K07187 IRS2; insulin receptor substrate 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000040_01418438_01423899.mRNA True 3396 mRNA 0.53 2 1418052 1423899

Neighbor

gene id symbol gene type direction distance location
CI01000040_01396138_01397237 ANKRD46, ANKRD46A, ANKRD46B coding downstream 20815 1395533 ~ 1397237 (-)
CI01000040_01384014_01394577 T185L, TMEM185A, TMEM185A.L, TMEM185, TMEM185B coding downstream 23475 1383373 ~ 1394577 (-)
CI01000040_01354920_01371380 STK26 coding downstream 46672 1354851 ~ 1371380 (-)
CI01000040_01315704_01327557 NA coding downstream 90446 1315175 ~ 1327606 (-)
CI01000040_01287654_01288940 NA coding downstream 127859 1287645 ~ 1290193 (-)
CI01000040_01429591_01433407 NA coding upstream 5592 1429491 ~ 1433407 (-)
CI01000040_01473636_01487928 WASF3 coding upstream 48726 1472625 ~ 1487928 (-)
CI01000040_01502802_01509001 NA coding upstream 78754 1502653 ~ 1509102 (-)
CI01000040_01528580_01529044 NA coding upstream 104656 1528555 ~ 1529842 (-)
CI01000040_01545998_01546582 NA coding upstream 121695 1545594 ~ 1546582 (-)
G184587 NA non-coding downstream 104618 1312913 ~ 1313434 (-)
G184573 NA non-coding downstream 133261 1281976 ~ 1284791 (-)
G184506 NA non-coding downstream 163314 1254191 ~ 1254738 (-)
G184497 NA non-coding downstream 269770 1128537 ~ 1148282 (-)
G184460 NA non-coding downstream 431830 985862 ~ 986222 (-)
G184651 NA non-coding upstream 139028 1562927 ~ 1582846 (-)
G184658 NA non-coding upstream 157556 1581455 ~ 1581991 (-)
G184664 NA non-coding upstream 177921 1601820 ~ 1602075 (-)
G184626 NA non-coding upstream 180223 1604122 ~ 1614037 (-)
G184665 NA non-coding upstream 228738 1652637 ~ 1656873 (-)
G183972 NA other downstream 584511 833140 ~ 833541 (-)
G183474 NA other downstream 1367326 46627 ~ 50726 (-)
CI01000040_02595281_02596387 FGF1B other upstream 1171347 2594895 ~ 2596728 (-)
G185593 NA other upstream 1568289 2992188 ~ 2992683 (-)
G185681 NA other upstream 1920576 3344475 ~ 3344880 (-)
G187207 NA other upstream 3840294 5264193 ~ 5286918 (-)
G187348 NA other upstream 4138756 5562655 ~ 5565553 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_019857 irs4a coding NC_007132.7 CM002905.2 43515673 ~ 43527198 (-)