CI01000040_01706518_01706939


Basic Information

Item Value
gene id CI01000040_01706518_01706939
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 1706518 ~ 1707234 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000040_01706518_01706939.mRNA
CAAATGAAGAACTAATCACCCCATATGATATGACAATGAGTCATTTGGATAAGAACTCAGCCCCTGACACCAAGCAGGGTCCACCCCAGGTGTCACCGTCTTCAGCATGCTGCGGGCTGGACGAGCTAAAGCAGTCACTCGCCCAACTCATTCAGGAAGAGCAGGAGAGCAGGGGCTGGTACGGTGAAATGGTGAAGAACCTAAATCAGTTGGTGCAAGAAAACAAGGAGGTGGCCAGCGTTCAGGCTGAAGTCCTGAAGGTCCTGCGGGCTGTGAGCGACCAGGGCGAGCAGCAACTGAGCCACCTCCAGAGCATGGCTCGCCTTCAGAGCCTCCTCGTAGAGAACCACCAGGCGCTGCTGCTGCAAGTGTCTCGCATTGCTACCATGCTGCAGGATGCAGTGAAGAGACAGGGCCAATAAATGCGCCGGCAAAACGGCCTACATTTAAAGCATTTTGATGACATATTATACTTGGACTAACAAAACGGCATGCAAAAAAGAATCACAAAATGTAGCTAAAACGAACTAAACATGAAATCCTAATCAAAAAAATCAAAGGAAGTACAAATCATTTTGTTGATGATCTTGTGTTTTGTGTTACTCTATCATAGCTATATAACATATCAAGTCAGTGTTTGAATGATTTTTTATACTGTTGTGTGTTACAGTTGATCTAACTTTACCTGTAACCTATTGCATGTGCTACAGACTTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000040_01706518_01706939.mRNA True 717 mRNA 0.46 1 1706518 1707234

Neighbor

gene id symbol gene type direction distance location
CI01000040_01604128_01609619 DKC1, DKC1.L coding upstream 96804 1604128 ~ 1609714 (+)
CI01000040_01579092_01597460 TMLHE coding upstream 108038 1579012 ~ 1598480 (+)
CI01000040_01553258_01557964 NA coding upstream 146351 1553258 ~ 1560167 (+)
CI01000040_01540821_01545220 NA coding upstream 161258 1540754 ~ 1545260 (+)
CI01000040_01539717_01540595 NA coding upstream 165869 1539590 ~ 1540649 (+)
CI01000040_01707444_01725985 NA coding downstream 47 1707281 ~ 1725985 (+)
CI01000040_01728828_01731709 KIF4A coding downstream 20538 1727772 ~ 1732232 (+)
CI01000040_01760148_01802721 AMMECR1 coding downstream 52914 1760148 ~ 1803002 (+)
CI01000040_01876498_01878546 FUNDC2 coding downstream 169264 1876498 ~ 1879308 (+)
CI01000040_01882704_01887004 BRCC3 coding downstream 174559 1881793 ~ 1887135 (+)
G184236 NA non-coding upstream 7882 1698123 ~ 1698636 (+)
G184235 NA non-coding upstream 10564 1695593 ~ 1695954 (+)
G184234 NA non-coding upstream 12318 1693802 ~ 1694200 (+)
G184231 NA non-coding upstream 14759 1691422 ~ 1691759 (+)
G184229 NA non-coding upstream 16851 1689456 ~ 1689667 (+)
G184268 NA non-coding downstream 162899 1870133 ~ 1870342 (+)
G184276 NA non-coding downstream 189998 1897232 ~ 1897596 (+)
G184295 NA non-coding downstream 239255 1946489 ~ 1946692 (+)
G184297 NA non-coding downstream 249295 1956529 ~ 1956873 (+)
G184324 NA non-coding downstream 320847 2028081 ~ 2112062 (+)
G184003 NA other upstream 470029 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 728355 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 1429663 240849 ~ 313275 (+)
G183420 NA other upstream 1541596 157543 ~ 164922 (+)
G183366 NA other upstream 1646121 53691 ~ 60397 (+)
G185296 NA other downstream 1626344 3333578 ~ 3333983 (+)
G185884 NA other downstream 2031753 3738987 ~ 3739281 (+)
G185947 NA other downstream 2266531 3973765 ~ 3974123 (+)
G187510 NA other downstream 4261811 5969045 ~ 5971732 (+)
G188149 NA other downstream 5101457 6808691 ~ 6809130 (+)

Expression


Co-expression Network