CI01000040_02975088_02975548


Basic Information

Item Value
gene id CI01000040_02975088_02975548
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 2975088 ~ 2975946 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000040_02975088_02975548.mRNA
GTGGCCCATCTCGCTGGTCATCTCCACCTTGCGACTGCTGCTGCAAGGGTCACAAAGGTGAAGGCGAAGGTGAGAGTGGAACCTCATTCAACGAGCTCTCCACCTCCAGCTCGGAGAGCCACTCCGAGGCCAGCTCCCCGCAAGGCACCGTCATCCGTGGCCCGGTCAGCCGGCAGACACACGTGCAAACATTGGACAGGCCTCCCAAGAAAGGCCCCGTTCAGCATCTCCTGCAGCAGCAGCAGTCCGAGCATCGCCGCAAGAGCGACCTACTCCGGACGCTCACCGCAAGTTCCCGGGACACCAGCACCTGCAAGAAGCGGCCAGCGAAAGAAAAGTTGACTGTGGAAGAGGAACTAGAGAAGTGCATCCAGGACTTCCGCAAGATCAAGATTCCCGAGCACTTTCCCGAGCGCAAGTACATGTGGCAAGCCGACCTCCTGCGCAAATACCGTCTTTGAGGAACGGCGGTAACCGTTTTCAAACCTTGAGCGCAAGCTACAAAAATGTACGTGTTCACTACTACAACTACTATTGCTAGTACACACCACACTACTACTGCCTCTGACTTTCTTGTCAATGCCGGTCGATAACCCGAGCGACCACTTCATCTGCTTGAATGCTAATTGTTTACTTGTAAACACCTGCATTTTTGTAGAGTTCCAGAGAGACGCAAATGTTTTAGAAAGACACACAGCTACTTGTCTCTTTGGTTTCGGTCTCCCTTGCTGAGCTACACAAATTTGTGTGTAATCGTGTGTTTGTTACAACTGAATTTTTGACCTCGGTATGTTAGTGCCACAGCGATTGAGTTGAGGTGGCCCAGAGGTTGAAAGATGAATGTGTATCCACCTCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000040_02975088_02975548.mRNA True 859 mRNA 0.52 1 2975088 2975946

Neighbor

gene id symbol gene type direction distance location
CI01000040_02889343_02891410 KCTD16B, KCTD16 coding upstream 83649 2889343 ~ 2891439 (+)
CI01000040_02650575_02692600 NA coding upstream 282417 2649543 ~ 2692671 (+)
CI01000040_02609749_02611069 ARHGAP26 coding upstream 363853 2609749 ~ 2611235 (+)
CI01000040_02602517_02603172 NA coding upstream 371465 2602357 ~ 2603623 (+)
CI01000040_02558495_02563310 NA coding upstream 411542 2558383 ~ 2563546 (+)
CI01000040_03168337_03198400 RBM27 coding downstream 192391 3168337 ~ 3198400 (+)
CI01000040_03212701_03215022 POU4F3 coding downstream 236755 3212701 ~ 3215168 (+)
CI01000040_03271519_03276006 NA coding downstream 295117 3271063 ~ 3276040 (+)
CI01000040_03297317_03298657 DRD1B, DRD1 coding downstream 320509 3296455 ~ 3298896 (+)
CI01000040_03761247_03762668 BOD1, FA44B coding downstream 785215 3761161 ~ 3762674 (+)
G185124 NA non-coding upstream 87413 2887451 ~ 2887675 (+)
G185121 NA non-coding upstream 112320 2862239 ~ 2862768 (+)
G185056 NA non-coding upstream 121584 2849039 ~ 2853504 (+)
G185116 NA non-coding upstream 126271 2848552 ~ 2848817 (+)
G185115 NA non-coding upstream 126564 2847832 ~ 2848524 (+)
G185103 NA non-coding downstream 1175 2977121 ~ 2977904 (+)
G185101 NA non-coding downstream 3427 2979373 ~ 2983138 (+)
G185135 NA non-coding downstream 31193 3007139 ~ 3007341 (+)
G185140 NA non-coding downstream 39960 3015906 ~ 3016163 (+)
G185154 NA non-coding downstream 54716 3030662 ~ 3030875 (+)
G184003 NA other upstream 1738599 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 1996925 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 2698233 240849 ~ 313275 (+)
G183420 NA other upstream 2810166 157543 ~ 164922 (+)
G183366 NA other upstream 2914691 53691 ~ 60397 (+)
G185296 NA other downstream 357632 3333578 ~ 3333983 (+)
G185884 NA other downstream 763041 3738987 ~ 3739281 (+)
G185947 NA other downstream 997819 3973765 ~ 3974123 (+)
G187510 NA other downstream 2993099 5969045 ~ 5971732 (+)
G188149 NA other downstream 3832745 6808691 ~ 6809130 (+)

Expression


Co-expression Network