CI01000040_03271519_03276006


Basic Information

Item Value
gene id CI01000040_03271519_03276006
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 3271063 ~ 3276040 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000040_03271519_03276006.mRNA
CTATAAAGTTGCATAAAATTTTATTAAAATAACTCACACAGGACAAATAACGCTGTAATCTCCACGTAAACTGTAATAGTTTGTTTTGACTGCAGGCAGCCAGTCAGTAAGTCAGTCGTGTGTTTCCCGCGTCGGCGCAGTGACGTTCTTCCGTATTCAACTCCGCGTCACGAGAATCATCTAGAAACTACATATCCCACAATGCAATTTAATAATAAATAAAAAAGAGCGATTCTTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAATAACCAATACATAAAACACAAGCAATTGTATTTATAATTAAATAAAGAAATTATATTAACTTATTTTCCCCGCCCATATGACCATATACAATTTCATTTAATAAAATTGTTTTGATTTTTAGGGACACTTCCTACAGCTGAATTTTCAAAAAGTGAACTTTGTAGTATTATTCACATTATGGCCTACATTAAAGCAGGATTTGTTGAAGTGGTGTGCTATTTTGAACACAGCCAATCATTGCAGCACATGGGTAAGGGAGATGACACTATACGCGAGGCACTTCACCATCTTAGAGACCTAATGGATTATGCACATCTCTTCACATTTGACATGAACCCAATATATGTACCAAATGTGCATATTGAAAGCGGAGAGATGTGCAGCTGTAAAGAATTCATTGCTCAAGAGCTTCTCAAGACATTAGTTTCAGCAGAAATCACTGATCAAGACGGCGCTGTCGAACCACGCACTGCCCTTAGACTCTTACAGCACAATATCAGATTTCTCCTTCAGAATTTGATCGGAGAACACTGTCTAAAAGACAAAGTCATGGTTCGCAAGGTTAATTTGAGGACTAATCAAGAGCTGATGTTCATCCGTCGATGTTTCGCTTTTTTCCAAGACTGGATGTCCAAATGCCTAACCAGCAGTGACTTTTGATTCATTCACTTTGACTTCTATTTAGTTGATTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000040_03271519_03276006.mRNA True 973 mRNA 0.36 5 3271063 3276040

Neighbor

gene id symbol gene type direction distance location
CI01000040_03212701_03215022 POU4F3 coding upstream 55895 3212701 ~ 3215168 (+)
CI01000040_03168337_03198400 RBM27 coding upstream 72663 3168337 ~ 3198400 (+)
CI01000040_02975088_02975548 NA coding upstream 295117 2975088 ~ 2975946 (+)
CI01000040_02889343_02891410 KCTD16B, KCTD16 coding upstream 379624 2889343 ~ 2891439 (+)
CI01000040_02650575_02692600 NA coding upstream 578392 2649543 ~ 2692671 (+)
CI01000040_03297317_03298657 DRD1B, DRD1 coding downstream 20415 3296455 ~ 3298896 (+)
CI01000040_03761247_03762668 BOD1, FA44B coding downstream 485121 3761161 ~ 3762674 (+)
CI01000040_03789687_03800746 STC2B coding downstream 513041 3789081 ~ 3800746 (+)
CI01000040_03939728_03943493 RNF121 coding downstream 662268 3938308 ~ 3943624 (+)
CI01000040_04047210_04060876 NA coding downstream 771170 4047210 ~ 4061675 (+)
G185175 NA non-coding upstream 121247 3125443 ~ 3149816 (+)
G185178 NA non-coding upstream 137375 3127811 ~ 3133688 (+)
G185235 NA non-coding upstream 152595 3115093 ~ 3118468 (+)
G185171 NA non-coding upstream 225255 3045440 ~ 3045808 (+)
G185163 NA non-coding upstream 232053 3038787 ~ 3039010 (+)
G185287 NA non-coding downstream 41761 3317801 ~ 3318156 (+)
G185290 NA non-coding downstream 46813 3322853 ~ 3323253 (+)
G185292 NA non-coding downstream 47926 3323966 ~ 3324197 (+)
G185255 NA non-coding downstream 69220 3345260 ~ 3345502 (+)
G185707 NA non-coding downstream 101765 3377805 ~ 3378351 (+)
G184003 NA other upstream 2034574 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 2292900 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 2994208 240849 ~ 313275 (+)
G183420 NA other upstream 3106141 157543 ~ 164922 (+)
G183366 NA other upstream 3210666 53691 ~ 60397 (+)
G185296 NA other downstream 57538 3333578 ~ 3333983 (+)
G185884 NA other downstream 462947 3738987 ~ 3739281 (+)
G185947 NA other downstream 697725 3973765 ~ 3974123 (+)
G187510 NA other downstream 2693005 5969045 ~ 5971732 (+)
G188149 NA other downstream 3532651 6808691 ~ 6809130 (+)

Expression


Co-expression Network