CI01000040_04047210_04060876


Basic Information

Item Value
gene id CI01000040_04047210_04060876
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 4047210 ~ 4061675 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000040_04047210_04060876.mRNA
ACCGTAGTGAGTTTCTGTGAGTTTATTTCACATTTCAAAGATCTCTGGATCTTTTTGGCTTTAGAAGATGATATTTGGTGGGATAATGGTGCTGACATCATATCCACGGTTGAGTTCAACTCGACAGGAGAACTCCTGGCCACTGGGGACAAAGGTGGACGCGTGGTGGTCTTCCAGAGAGAGCAGGAGAGTAAGAACCAGCCTCACCGTCGGGGGGAGTACAATGTTTACAGCACCTTTCAGAGCCATGAGCCCGAATTTGACTACTTGAAAAGCCTAGAGATTGAGGAGAAGATCAACAAGATCCGCTGGCTGCCTCAACAGAATGCTGCCTATTTCCTCTTGTCCACTAATGATAAAACTGTGAAACTATGGAAAATCAGTGAGCGAGACAAACGACCAGAGGGCTACAATCTGAAGGATGAAGATGGTAGGATACGGGACCCCACCACCATCACAGCTCTGAGGAAAATCAGGGCATTTATCACTTTGCACAGACTGAGCAGAGAGGAGAAGGAGATAAAGGGGGAGTGGAGGGCTGCGCATATGAAAAACCTCACAGGGAGTCGGACACTGACTGCGACGCAGTACCCCTCCCGTGAAGCACATGTGCCTGTGTTGAGACCCATGGACTTGATGGTGGAGGCAACACCTCGTCGCATTTTCTCTAATGCTCACACCTATCACATCAACTCCATCTCGGTCAACAGTGACAATGAAACATACATGTCCACAGATGACCTGAGGATCAACCTGTGGAACTTGGAGATCACAAACCGAAGCTTTAGTATCCTTTTACACTCAGATGGTTGACGACAATCTCAGATGGTTGCATGTCTGAAAAATTTTGGGTCTCTGTTTTTTGTCATTGTATGTAAAGAATTGAGATAATTAATTTCAATGATGGTAACTTTTACCTTTTTCAGAAGCAATTATTTGGCTATAAAGTAAATAGTTTAAGCTTTAACATCAAATTAGAACAGTCTATCTTTCCGTTCTCTAAACAGCTTGTTCTATGTGGGGTCACTGGGTTGCTGGAGCCTATCCCAGCACTTCGGGGCGAAGTGAGGGAAACACCCTGGACCGATGGCCAATCCATTACATAGCTAACAGAAACAGACACACATTCACACTCAAACCTCCAAGCAATTTATTGTTTCCAGTCTAACCTGGAGGAAACCACACCAGCACAGGAAGAACATCCAGACTCCAGACAGAAAGGCCTCCTTGCTCAGCCAGGCTTTGAACCGGAGACCTATTAGAAGATTCAAATTGTAAAAATTGAATACTTTAAGTAATGTTCCAAGTAAACATATATATGATAACACATACAGCTTGGCTAATGAACTATAGGCCTGTATCTTGATGGAAGAATTGATGCAAAATGCAATATTATAAAAGTTAAGCCTTTTTGCATCATATATCACAGCATTCCTCAACCATAGTAAAATCACAGTAATGCAGGGCTTCACTAACTTTTTTTACTAGGAACGCTGTAGCCACTTACTGAAAATTTTAGGAGCACAAGCAGAAAATTTAGGGGCACACTTTAAATCAACCCCTATTTACATTTTTCCCCATTTTGACTGTATTACTGACAAATGCCTTAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000040_04047210_04060876.mRNA True 1612 mRNA 0.43 7 4047210 4061675

Neighbor

gene id symbol gene type direction distance location
CI01000040_03939728_03943493 RNF121 coding upstream 103586 3938308 ~ 3943624 (+)
CI01000040_03789687_03800746 STC2B coding upstream 246464 3789081 ~ 3800746 (+)
CI01000040_03761247_03762668 BOD1, FA44B coding upstream 284536 3761161 ~ 3762674 (+)
CI01000040_03297317_03298657 DRD1B, DRD1 coding upstream 748314 3296455 ~ 3298896 (+)
CI01000040_03271519_03276006 NA coding upstream 771170 3271063 ~ 3276040 (+)
CI01000040_04063098_04068134 PPP2R2B coding downstream 1272 4062947 ~ 4068198 (+)
CI01000040_04369595_04374831 NA coding downstream 306790 4368465 ~ 4375355 (+)
CI01000040_04442810_04474877 MAP4K6 coding downstream 380122 4441797 ~ 4475124 (+)
CI01000040_04475476_04499896 NA coding downstream 413637 4475312 ~ 4500113 (+)
CI01000040_04503393_04506409 HMGB3B coding downstream 440048 4501723 ~ 4506409 (+)
G185959 NA non-coding upstream 37919 4009068 ~ 4009291 (+)
G185955 NA non-coding upstream 57289 3989680 ~ 3989921 (+)
G185938 NA non-coding upstream 79788 3967202 ~ 3967422 (+)
G185791 NA non-coding upstream 131750 3914585 ~ 3915460 (+)
G185788 NA non-coding upstream 132734 3913310 ~ 3914476 (+)
G186041 NA non-coding downstream 152441 4214116 ~ 4226490 (+)
G186057 NA non-coding downstream 178391 4240066 ~ 4240279 (+)
G186064 NA non-coding downstream 190367 4252042 ~ 4252331 (+)
G186040 NA non-coding downstream 193312 4254987 ~ 4257290 (+)
G186128 NA non-coding downstream 348244 4409919 ~ 4410206 (+)
G185947 NA other upstream 73087 3973765 ~ 3974123 (+)
G185884 NA other upstream 307929 3738987 ~ 3739281 (+)
G185296 NA other upstream 713227 3333578 ~ 3333983 (+)
G184003 NA other upstream 2810721 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 3069047 977184 ~ 978163 (+)
G187510 NA other downstream 1907370 5969045 ~ 5971732 (+)
G188149 NA other downstream 2747016 6808691 ~ 6809130 (+)
CI01000040_06833701_06848731 NA other downstream 2776449 6832987 ~ 6849135 (+)

Expression


Co-expression Network