G183502


Basic Information

Item Value
gene id G183502
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 191161 ~ 191518 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU208395
TTTACACTTATTCGTCTATGATATCATACAATGTTAAAAACATTTAAATATACATATCACACACACATTATTGTGTAACAATTTTAGTGGCTTGTGTATAATTGTGGCTTACCTGTTATTCGGTAGAATTCGTTTTGCTGCTTTCCCTGCATCATTTGGCACTGTAATAAGTTTTCCCTCAGTAATTGTTTGCCTTATCGCACTCATAGTCAGAGGTTTGAGTGTTATGTGCCACGTTGTGACTGAAAGAGTGCGAGAGAGGGGAATCACATGCACAAAACAGTTAATATATAAATGTGAATTATAAATGTGCTCCCACTCTCGCCTGCTCTTTCGAGCACAACACAGAAGACGGCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208395 True 358 lncRNA 0.38 1 191161 191518

Neighbor

gene id symbol gene type direction distance location
CI01000040_00153873_00173202 GABRA6B, GABRA6 coding downstream 17959 153873 ~ 173202 (-)
CI01000040_00081665_00111856 GABRA1 coding downstream 78967 80979 ~ 112194 (-)
CI01000040_00002763_00060396 GABRG2 coding downstream 130765 2763 ~ 60396 (-)
CI01000040_00413047_00426023 NA coding upstream 221487 413005 ~ 427064 (-)
CI01000040_00569008_00598590 STK10 coding upstream 377242 568760 ~ 598590 (-)
CI01000040_00623449_00625433 NA coding upstream 431905 623423 ~ 626036 (-)
CI01000040_00626750_00628543 NA coding upstream 434963 625832 ~ 628694 (-)
CI01000040_00701332_00746419 DPYSL3, DPYSL3.S, DPYL3 coding upstream 509315 700833 ~ 746964 (-)
G183500 NA non-coding downstream 2501 188416 ~ 188660 (-)
G183476 NA non-coding downstream 75067 115868 ~ 116094 (-)
G183475 NA non-coding downstream 104072 82889 ~ 87089 (-)
G183508 NA non-coding upstream 5898 197416 ~ 313352 (-)
G183598 NA non-coding upstream 152814 344332 ~ 346939 (-)
G183641 NA non-coding upstream 189078 380596 ~ 397197 (-)
G183684 NA non-coding upstream 237157 428675 ~ 428891 (-)
G183474 NA other downstream 140435 46627 ~ 50726 (-)
G183972 NA other upstream 641622 833140 ~ 833541 (-)
CI01000040_02595281_02596387 FGF1B other upstream 2403728 2594895 ~ 2596728 (-)
G185593 NA other upstream 2800670 2992188 ~ 2992683 (-)
G185681 NA other upstream 3152957 3344475 ~ 3344880 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G27953 NA non-coding NC_047596.1 CM018542.1 15503832 ~ 15504043 (-)