G183630


Basic Information

Item Value
gene id G183630
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 380608 ~ 397139 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU208529
TGTGGTTAAAAAGTATGTAATTTTTTATTTTTTTTAGAAAATGACTGATGGTTTCTCTAGATAAGACTCTTATTCCTCGTCTGGGATCATGTAGAGCTCTTTGAAGCTGCACTGAAACTGACATTTGGACCTTCAACCCGTTGAACCCCAGTGGAGTCCACTATATGGAGAAAAATCCTGGAATGTTTTCCTCAAAAACCTTCATTTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208529 True 210 lncRNA 0.37 2 380608 397139

Neighbor

gene id symbol gene type direction distance location
CI01000040_00347516_00350540 NA coding upstream 30007 347516 ~ 350601 (+)
CI01000040_00240852_00305487 GABRB2 coding upstream 75121 240849 ~ 313275 (+)
CI01000040_00178642_00181455 NA coding upstream 198417 178604 ~ 182404 (+)
CI01000040_00512880_00513451 NA coding downstream 115741 512880 ~ 513597 (+)
CI01000040_00554753_00561571 NA coding downstream 157614 554753 ~ 562993 (+)
CI01000040_00643738_00689792 STK32B, STK32A coding downstream 246599 643738 ~ 689918 (+)
CI01000040_00839831_00841736 NA coding downstream 442692 839831 ~ 841736 (+)
CI01000040_00849226_00851895 NA coding downstream 452087 849226 ~ 851915 (+)
G183628 NA non-coding upstream 159 380121 ~ 380449 (+)
G183603 NA non-coding upstream 22933 357433 ~ 357675 (+)
G183465 NA non-coding upstream 33694 346374 ~ 346914 (+)
G183459 NA non-coding upstream 43575 336819 ~ 337033 (+)
G183456 NA non-coding upstream 47963 332419 ~ 332645 (+)
G183649 NA non-coding downstream 1894 399033 ~ 399304 (+)
G183650 NA non-coding downstream 2523 399662 ~ 399893 (+)
G183705 NA non-coding downstream 52101 449240 ~ 449601 (+)
G183708 NA non-coding downstream 54579 451718 ~ 451946 (+)
G183724 NA non-coding downstream 83055 480194 ~ 480404 (+)
G183420 NA other upstream 215686 157543 ~ 164922 (+)
G183366 NA other upstream 320211 53691 ~ 60397 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other downstream 576974 977184 ~ 978163 (+)
G184003 NA other downstream 833153 1230292 ~ 1236489 (+)
G185296 NA other downstream 2936439 3333578 ~ 3333983 (+)
G185884 NA other downstream 3341848 3738987 ~ 3739281 (+)
G185947 NA other downstream 3576626 3973765 ~ 3974123 (+)

Expression


Co-expression Network