G183757


Basic Information

Item Value
gene id G183757
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 594638 ~ 598206 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU208672
GTTCCACATTGCTGCTTACTGATTTTCCCAGTAAGGATAGAGAAAAAAAGATTAACTGACCAGTTAGCATATGCATGGATTGGATACACATTTATGTGTCAGCTATGACAGATGACTTGTGTGGAGGACAATCTGATGTTTGGAGGACCAGCATCTCTATCACATGAGCATGTTTAAAGTTTCTCTCTCAGGAAGTGGTAAAGGCCAGATATTCTAGTATCTATTGGCCTGGCATTTCGGGGTACCATTAACCAACACACAATGAAGCCACATTCGGTTACATGTTCAGCAGCATTCAGAGGAAATAATTCTCTCATTGAATTGCTAAATCCAATGAGACTTGAGTAGAGAAGTGTAATGAAATATTATAAGTCAGCTCTTGGCAAACTGTGGTACTTTTCAACACAACCTACAACAATACAATGCAGGGTTTCAGGGAAATTTAGATTGTGTCTGTGTAGATTAGATGGTAATCAAACCATCAGTTCTTGTAATCAAGGTGTTGGATGTGGGAGAAATAAGCAGGAATATCTGAGATCTGAGTGTCTTTGACAAGGACCAAATTGTTATGTCAAGGTGACTGGGTCAGAGTAGGGATCTGAGGAGGGATCGGGTGTTGAGTGCCCAAGGCTCATCGAAACATGAGGGCAACATAGGCTATCCTGTCTGGTCTGAGCCAAGAGAAGGTCTGCTGTGGCACAAGTCACACAAAATGTCACTGATGGTTATGGGAGGAATGTGTTACAACACATAATGCATTGCACTCTGTTGCGTATGGGGCTATGTAGCGTATGGTGTCTATGATGACCCCTGTCCACTGTTGAAAGTGCCTACAATGGGCACGTGAGCATCAGAACTGGATCATAGATCAGTGGAAGATGGTTGCCTGGTCCAATGAGTCCCGTTTTCTTTTACATTACGTGGACGGCCGTGTACATGTGTGCCGTATACCTGAAGAAGTGATGGCACCGGATCACTGTGGGATAACGACAAGCCGGTGGAGGGAGTGTGATGCACTGGACAATGTTCTGCTGGAAAACCCTAGGTCCGGCAAATTTAACACGTGACACCTACCTAATCATTGTTGCAGACCAGGTACACCCCTTCAGGACAATGGTGTTTCCTGGTGGAAGTGGCCTCTGTTACGAAAGGCTATTTACTTGAGGGTTGTTTGGAAAGATGCATATTGTGTGTGTAGGTTCTTTTCCTTCGTGTGTTTTTCCCTTTCTTGTCTCTTCACTGTTACTGCTCACAGGTGGAGCTGATTCATGGATGGATCTGATTGGTGACAGGAGTGACTGCAGCTGTATTTAAGCCTCCAGGATGATGGAAACATCGGCTCCCTGCTCTCATGTCTTCCTCTGTGTTAGTTTCTACTGTGATTTCGTGAGACATTGGTATACGAGATATTTGTTGCAACCTGTTAAATTAAGTGAACTACTAAGTTGTGATTTATTATTGTTACGTTCTGCTTCTCTCTTCCAGACCATTGTTTGGAGCATGGTAGGGAGGTGGGTGCCTGTTTGTTTTGTTAGTTTTCTCCTGTTTATGTTAGCAGGGAGGGAAGTTTTTGTACTTTCTTTGTAATCTGTTTTCCAGGTTATTTTGTAAATGTTAGTTTTGCTTCTTGTTATTTGTTTTGGCTTTTACCCCTCCAAAAGTTTATGTTGCTCTTTATTCTTGTTTAATAAATTCATTTTCCTTGCACTTTAAAAGTGTTTTGTTGTTGTAAAGTTCTGGGAGTGAGAGCGGGACTCAAGGGATCTTTTTAATAGGATCCCTGTTAATTGTTACGGAGAGTTTCATTCTCTTTGAGTAGGGGTTTAACCAATTCATAACACCTCTTTCAGCAGGATAATGCTCCTGCCACACTGCACACATTGTTCAGGAATGGTTTGAGGAACATGATGAAGAGTTCAAGGTGTTGTCCTGGCCTCCAAATTCCCCAAATATCAATCCAATTGAGCATCTGTAGGATGCTCAATTGGATTGAAAAAACTTTTCCAGCTTTATTTACAAATTTTGCCTTACAACATCAAAGTAATGAAAGAAAAACCAAGAGTTCTGAAAATAATAGAAAACTAAAAAATTAGAATAACAGGGTTGGAAAAGTCATCAGTCACCTGATTTAATACTTCGTAGAGCCATCTTTTGCTTTAATTACAGCCATTAATCTTTTTGGATATGTCTGCAGTAGCTTTTCACACCTAGATTGGGGAATATTTGCCCATTCTTCCTTGCAGAACTGCTCAAGTTCAGTCAAATTCCATGGTGAGCGGCAATGGACAAGTCCATCCACAGATTTTCTATGGGATTTAAGTCAGGGCTCTGACTCGGCCACTCAAGGACATTCACCTTCCTATCCTTATGCCATTGCAATGTTCTTTTGGTGGTATGATTAGGATCATTGTCGTGTTGGAAGGTGGATGACCTGCCCATCTTCAGCTGTCTAGCAGAGGGATGCAGGTTTTCCTCAAGAATTTGGATGTACTTGGCAGCATCCATTTTCCCTTCAATCCTGAGCAATCGCCCAGTCCCCGCTGAAGAGAAACACCCCCACAACATAATGCTGCCACCACCATGCTCCACAGTAGGTATGGTGTGTTTTCAGTGGTGTGCTGTGTTTGCTTTTCACCAAACATAGCACCTGGAGTTCAGTCCAAAAATGTCAATTATGGTCTCATCAGACCATAGCACATTCCAGTCTTCCAGGTGTGTTTTTGCATAGCGCAAATGAGACCGAGTGTGGCACTTTTTGTTTCTTTCTATCAGCGCTATGTTTGTATGTTTTCAGTGACATCTCTTCTCTGATGATGTGTTTACTGGCACGAGGGCCAGACAATCCAATCAATCCACCAATTCCCCATGGACAAAATCAAGTCCCGTCCTACATTCTTTTCTTGTTCAAGAAGTGTACGTCACAATAGGAAAAAAAGACTATCGCACCTGACTTTAAACTGCTGCTGACTGAAATCGGATAATCAGTCTGACTGTTCATATACAAACCTAGCTTGATGTCTCCATCCAGTGTGAGGAGAATGTTTCCAGCCTTTAGGTCTCTGTGGATGATCTTCATGCTGTGGAGGTACTGAAGAGCCTCCAACATCTGTTTACAGATCACCCGGATCTGAGGTTCTTGAAGACCCTTGTCCAGCTCTAAAGACAAAAACAAACATCGAACTCTTCAGATCAGAGAACCAAGTGAATGAATCTCATAATGTC

Function

NR:

description
reverse transcriptase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208672 True 3222 lncRNA 0.42 2 594638 598206

Neighbor

gene id symbol gene type direction distance location
CI01000040_00554753_00561571 NA coding upstream 31645 554753 ~ 562993 (+)
CI01000040_00512880_00513451 NA coding upstream 81041 512880 ~ 513597 (+)
CI01000040_00366809_00384965 NA coding upstream 209379 366709 ~ 385259 (+)
CI01000040_00347516_00350540 NA coding upstream 244037 347516 ~ 350601 (+)
CI01000040_00240852_00305487 GABRB2 coding upstream 289151 240849 ~ 313275 (+)
CI01000040_00643738_00689792 STK32B, STK32A coding downstream 45532 643738 ~ 689918 (+)
CI01000040_00839831_00841736 NA coding downstream 241625 839831 ~ 841736 (+)
CI01000040_00849226_00851895 NA coding downstream 251020 849226 ~ 851915 (+)
CI01000040_00863147_00874526 NA coding downstream 264941 863147 ~ 874546 (+)
CI01000040_00879146_00889251 NA coding downstream 280940 879146 ~ 889483 (+)
G183748 NA non-coding upstream 8894 578849 ~ 585744 (+)
G183724 NA non-coding upstream 114234 480194 ~ 480404 (+)
G183708 NA non-coding upstream 142692 451718 ~ 451946 (+)
G183705 NA non-coding upstream 145037 449240 ~ 449601 (+)
G183650 NA non-coding upstream 194745 399662 ~ 399893 (+)
G183782 NA non-coding downstream 45054 643260 ~ 643491 (+)
G183783 NA non-coding downstream 45950 644156 ~ 644427 (+)
G183784 NA non-coding downstream 48218 646424 ~ 646725 (+)
G183785 NA non-coding downstream 48548 646754 ~ 647046 (+)
G183786 NA non-coding downstream 50102 648308 ~ 648632 (+)
G183420 NA other upstream 429716 157543 ~ 164922 (+)
G183366 NA other upstream 534241 53691 ~ 60397 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other downstream 375907 977184 ~ 978163 (+)
G184003 NA other downstream 632086 1230292 ~ 1236489 (+)
G185296 NA other downstream 2735372 3333578 ~ 3333983 (+)
G185884 NA other downstream 3140781 3738987 ~ 3739281 (+)
G185947 NA other downstream 3375559 3973765 ~ 3974123 (+)

Expression


Co-expression Network