G183780


Basic Information

Item Value
gene id G183780
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 699712 ~ 700174 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU208696
ATAACATGATTTTGTAGGAATTGTAACCAGGTGCTAAAAGAGAGTACAAGCAATTTGAACCAATGGGATCGCTTGGGGTCCTAAAGGAGACCCGATTTCAGTTGGGACCCAATTTGTCACTACACCGGAACGCATGCAAGCTACAGCGACAATGTTGGCCTACATAGACGACAGACTGTGCGAAGAGGTTAGAAAGTACCATCATTTGTACAACTCTAGCATGAAAGAATACAAAGATGTTTACATGGGTTGTAACTCGTGGCGAGAGACTGATCAAAACTGCACATGCGTCGAACGCCTGTGTACGCATACGAGTCAAGTGAAGTGTACTTTAAAAGGCTATGCGTTCGACTGTGCATGTACGCGTAAAAAAATGAAGTATACCCAGGGCTTTAGAAATGTTTTATGTCTGTGTGTATGTTTTAGACTAGTTTTGATTTCCTTGAACTGTGAGGTGATTAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208696 True 463 lncRNA 0.42 1 699712 700174

Neighbor

gene id symbol gene type direction distance location
CI01000040_00643738_00689792 STK32B, STK32A coding upstream 9794 643738 ~ 689918 (+)
CI01000040_00554753_00561571 NA coding upstream 136719 554753 ~ 562993 (+)
CI01000040_00512880_00513451 NA coding upstream 186115 512880 ~ 513597 (+)
CI01000040_00366809_00384965 NA coding upstream 314453 366709 ~ 385259 (+)
CI01000040_00347516_00350540 NA coding upstream 349111 347516 ~ 350601 (+)
CI01000040_00839831_00841736 NA coding downstream 139657 839831 ~ 841736 (+)
CI01000040_00849226_00851895 NA coding downstream 149052 849226 ~ 851915 (+)
CI01000040_00863147_00874526 NA coding downstream 162973 863147 ~ 874546 (+)
CI01000040_00879146_00889251 NA coding downstream 178972 879146 ~ 889483 (+)
CI01000040_00895179_00895620 NA coding downstream 195005 895179 ~ 895649 (+)
G183778 NA non-coding upstream 1946 697294 ~ 697766 (+)
G183813 NA non-coding upstream 4269 694887 ~ 695443 (+)
G183802 NA non-coding upstream 30042 669431 ~ 669670 (+)
G183800 NA non-coding upstream 30995 668513 ~ 668717 (+)
G183797 NA non-coding upstream 37168 661994 ~ 662544 (+)
G183775 NA non-coding downstream 138 700312 ~ 701605 (+)
G183822 NA non-coding downstream 28877 729051 ~ 733191 (+)
G183825 NA non-coding downstream 41880 742054 ~ 742277 (+)
G183827 NA non-coding downstream 47820 747994 ~ 748295 (+)
G183828 NA non-coding downstream 50601 750775 ~ 751079 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 422857 240849 ~ 313275 (+)
G183420 NA other upstream 534790 157543 ~ 164922 (+)
G183366 NA other upstream 639315 53691 ~ 60397 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other downstream 273939 977184 ~ 978163 (+)
G184003 NA other downstream 530118 1230292 ~ 1236489 (+)
G185296 NA other downstream 2633404 3333578 ~ 3333983 (+)
G185884 NA other downstream 3038813 3738987 ~ 3739281 (+)
G185947 NA other downstream 3273591 3973765 ~ 3974123 (+)

Expression


Co-expression Network