G183831


Basic Information

Item Value
gene id G183831
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 752685 ~ 753250 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU208748
CCAAGATGTCCTTCTTTCTTCAGTCGAAAAGAAATTAAGGTTTTTGATGAAAACATTCCAGGATTATTCTCCTTATTGGCCCCAAATGGTTGAAGGTCAAAATTACAGTTTCAGTGCAGCTTCAAAGAGCTCTACATGATACCAGACGAGGAATGAGGGTCTTATGTAGCGAAACGATTGGTCATTTTCTAAAAAAAAAATAAAAAATGATATACGTTTTAACCATAGATGCCCGTCTTGAACTAGCTCTCTTCTTCTTCTTCTCTATTAGAATTCCGGCAGTGTAGACGCTGCTAAGTATATTACTGAGCTCCACAGGTCAAAGTTTGAACTAAATTGTCATATACAATATGCTAGTGCAAGTATATAACAATTAGTTCAAACTCCTAATGTGTGTGCACTAACTTGGATGGGTTAAATCCAGAGGACAAATGGTGTGGGTTACCATACTCGCCCTTCACATGTCACTTTCAAGCACATCCTACTAGGCATATATCCAAAAGAAAACATTAGCGAGTAGTGAACACACACACACTGCAAACCGTGGACACACACACACACAGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208748 True 566 lncRNA 0.39 1 752685 753250

Neighbor

gene id symbol gene type direction distance location
CI01000040_00643738_00689792 STK32B, STK32A coding upstream 62767 643738 ~ 689918 (+)
CI01000040_00554753_00561571 NA coding upstream 189692 554753 ~ 562993 (+)
CI01000040_00512880_00513451 NA coding upstream 239088 512880 ~ 513597 (+)
CI01000040_00366809_00384965 NA coding upstream 367426 366709 ~ 385259 (+)
CI01000040_00347516_00350540 NA coding upstream 402084 347516 ~ 350601 (+)
CI01000040_00839831_00841736 NA coding downstream 86581 839831 ~ 841736 (+)
CI01000040_00849226_00851895 NA coding downstream 95976 849226 ~ 851915 (+)
CI01000040_00863147_00874526 NA coding downstream 109897 863147 ~ 874546 (+)
CI01000040_00879146_00889251 NA coding downstream 125896 879146 ~ 889483 (+)
CI01000040_00895179_00895620 NA coding downstream 141929 895179 ~ 895649 (+)
G183830 NA non-coding upstream 757 751570 ~ 751928 (+)
G183829 NA non-coding upstream 1212 751198 ~ 751473 (+)
G183828 NA non-coding upstream 1606 750775 ~ 751079 (+)
G183827 NA non-coding upstream 4390 747994 ~ 748295 (+)
G183825 NA non-coding upstream 10408 742054 ~ 742277 (+)
G183776 NA non-coding downstream 769 754019 ~ 758059 (+)
G183842 NA non-coding downstream 41509 794759 ~ 794960 (+)
G183844 NA non-coding downstream 47164 800414 ~ 800757 (+)
G183846 NA non-coding downstream 53715 806965 ~ 807205 (+)
G183847 NA non-coding downstream 56515 809765 ~ 810023 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 475830 240849 ~ 313275 (+)
G183420 NA other upstream 587763 157543 ~ 164922 (+)
G183366 NA other upstream 692288 53691 ~ 60397 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other downstream 220863 977184 ~ 978163 (+)
G184003 NA other downstream 477042 1230292 ~ 1236489 (+)
G185296 NA other downstream 2580328 3333578 ~ 3333983 (+)
G185884 NA other downstream 2985737 3738987 ~ 3739281 (+)
G185947 NA other downstream 3220515 3973765 ~ 3974123 (+)

Expression


Co-expression Network