G183846


Basic Information

Item Value
gene id G183846
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 806965 ~ 807205 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU208766
CTCTGAATTAATTGCGGTTCTTGTAAACTCTCTTACCCTGTCCAGATGACAGCTGAATCTGATGGGAAAATGAAGCAAGCTGGTAAAGAACCTCCTCTTTAGTAACAACGGCTTCCTCTCCCTTATTGAGTTTCCTGAAGGTTTCTTCCATCCAGAGGAGGGCATACTGAAAGCGTTGATTGAGATAAGAGATCATGGCGATATGGAAAGTTTCATCTGGATCCAGTCTTAAGTTGTGGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208766 True 241 lncRNA 0.43 1 806965 807205

Neighbor

gene id symbol gene type direction distance location
CI01000040_00643738_00689792 STK32B, STK32A coding upstream 117047 643738 ~ 689918 (+)
CI01000040_00554753_00561571 NA coding upstream 243972 554753 ~ 562993 (+)
CI01000040_00512880_00513451 NA coding upstream 293368 512880 ~ 513597 (+)
CI01000040_00366809_00384965 NA coding upstream 421706 366709 ~ 385259 (+)
CI01000040_00347516_00350540 NA coding upstream 456364 347516 ~ 350601 (+)
CI01000040_00839831_00841736 NA coding downstream 32626 839831 ~ 841736 (+)
CI01000040_00849226_00851895 NA coding downstream 42021 849226 ~ 851915 (+)
CI01000040_00863147_00874526 NA coding downstream 55942 863147 ~ 874546 (+)
CI01000040_00879146_00889251 NA coding downstream 71941 879146 ~ 889483 (+)
CI01000040_00895179_00895620 NA coding downstream 87974 895179 ~ 895649 (+)
G183844 NA non-coding upstream 6208 800414 ~ 800757 (+)
G183842 NA non-coding upstream 12005 794759 ~ 794960 (+)
G183776 NA non-coding upstream 48906 754019 ~ 758059 (+)
G183831 NA non-coding upstream 53715 752685 ~ 753250 (+)
G183830 NA non-coding upstream 55037 751570 ~ 751928 (+)
G183847 NA non-coding downstream 2560 809765 ~ 810023 (+)
G183849 NA non-coding downstream 13901 821106 ~ 823335 (+)
G183970 NA non-coding downstream 25100 832305 ~ 832856 (+)
G183971 NA non-coding downstream 25940 833145 ~ 833531 (+)
G183981 NA non-coding downstream 34537 841742 ~ 842086 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 530110 240849 ~ 313275 (+)
G183420 NA other upstream 642043 157543 ~ 164922 (+)
G183366 NA other upstream 746568 53691 ~ 60397 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other downstream 166908 977184 ~ 978163 (+)
G184003 NA other downstream 423087 1230292 ~ 1236489 (+)
G185296 NA other downstream 2526373 3333578 ~ 3333983 (+)
G185884 NA other downstream 2931782 3738987 ~ 3739281 (+)
G185947 NA other downstream 3166560 3973765 ~ 3974123 (+)

Expression


Co-expression Network