G184436



Basic Information


Item Value
gene id G184436
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 908093 ~ 911011 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU209451
TCTGATAACCCTCCAAATATAATGGCACCTGTCAGTACTCCTCCCATGTAAATGGTCTGGCTCATCTGTTTGAGTGGACGTAGGGTACAAACTAAATCTTCTGATACTATAGATGAGATGAATTCAGTCTTGTCATATGTCCAGCCATCTGCACAACCCTCTGTCTGCAGTTCAGTTGCATTTCTGTAACTCAGTTGTTCTGTGATTAAATGCCACTGAGTATCAGTGTACCGAGAGCATTTGGACAGTGTCAGTGATGAATCCAGTGGGATAAACGCACGCAGGAGTGCCGCTGTGCTCTCATTCAGTGCAGCCGTTATATTTGGTATGCGACAGTGATGTTCCGGTACACCAGCAGTAAAGTTATTTAGTAAATTCTGGCTAGCCATCAGAAGGCCCGGGATGGACAGAAGAGCGACATGAATCAGCTGAAAGCGTCCAAACCCGCCAACTTCATTCAGAAGATCCGCAAAGCCCATACTGATCCGAGACTCCCGTAATATTTCTAGATCTGAGGAGTTTTCCTCAGCAGATTGACACAACTCACCACGACTAAACTCTTAATCTTAGATGAAAAACAAGCAAAAAAGCTATTTAAAACTTTGAATGATTAATTTTGGGGTTAATGGTTGCCAAAGGACTTTCTGATTCTGAAAACTAAGCATTCTTCTAAACACAATCACACAAACACAGAGCTGAACTGAATTAAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU209451 True 711 lncRNA 0.42 2 908093 911011

Neighbor


gene id symbol gene type direction distance location
CI01000040_00837863_00839807 NA coding downstream 68286 837463 ~ 839807 (-)
CI01000040_00810717_00829640 P4HA2 coding downstream 78453 810409 ~ 829640 (-)
CI01000040_00795062_00809762 NA coding downstream 98331 794937 ~ 809762 (-)
CI01000040_00760116_00779888 JAKMIP2 coding downstream 127211 760116 ~ 780882 (-)
CI01000040_00701332_00746419 DPYSL3, DPYSL3.S, DPYL3 coding downstream 161129 700833 ~ 746964 (-)
CI01000040_00961941_00973627 IK coding upstream 50930 961941 ~ 973627 (-)
CI01000040_01002406_01015284 NA coding upstream 89711 1000722 ~ 1015284 (-)
CI01000040_01134768_01140438 SRA1 coding upstream 223408 1134419 ~ 1141116 (-)
CI01000040_01150384_01152552 SRA1 coding upstream 239024 1150035 ~ 1152552 (-)
CI01000040_01160713_01185710 HSPA4A, HSPA4 coding upstream 249064 1160075 ~ 1186329 (-)
G184430 NA non-coding downstream 10954 888626 ~ 897139 (-)
G184428 NA non-coding downstream 26320 881513 ~ 881773 (-)
G183962 NA non-coding downstream 107425 800427 ~ 800668 (-)
G183960 NA non-coding downstream 109529 798352 ~ 798564 (-)
G183959 NA non-coding downstream 110554 797327 ~ 797539 (-)
G184445 NA non-coding upstream 22417 933428 ~ 954673 (-)
G184460 NA non-coding upstream 74851 985862 ~ 986222 (-)
G184497 NA non-coding upstream 217526 1128537 ~ 1148282 (-)
G184506 NA non-coding upstream 343180 1254191 ~ 1254738 (-)
G184573 NA non-coding upstream 370965 1281976 ~ 1284791 (-)
G183972 NA other downstream 74552 833140 ~ 833541 (-)
G183474 NA other downstream 857367 46627 ~ 50726 (-)
CI01000040_02595281_02596387 FGF1B other upstream 1684235 2594895 ~ 2596728 (-)
G185593 NA other upstream 2081177 2992188 ~ 2992683 (-)
G185681 NA other upstream 2433464 3344475 ~ 3344880 (-)
G187207 NA other upstream 4353182 5264193 ~ 5286918 (-)
G187348 NA other upstream 4651644 5562655 ~ 5565553 (-)

Expression



Co-expression Network