Gene
RNA
| Item | Value |
|---|---|
| gene id | G184077 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000040 |
| NCBI id | null |
| chromosome length | 6879596 |
| location | 1075643 ~ 1121547 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU209026 | True | 517 | lncRNA | 0.45 | 2 | 1075643 | 1121547 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000040_01036304_01041594 | CDX1B | coding | upstream | 33874 | 1035474 ~ 1041769 (+) |
| CI01000040_00981074_00988746 | NA | coding | upstream | 86836 | 981074 ~ 988807 (+) |
| CI01000040_00977184_00977458 | NDUA2, NDUFA2 | coding | upstream | 98132 | 977184 ~ 978163 (+) |
| CI01000040_00941839_00959939 | NA | coding | upstream | 115589 | 941839 ~ 960054 (+) |
| CI01000040_00908325_00928762 | OATX | coding | upstream | 146817 | 907887 ~ 928826 (+) |
| CI01000040_01206296_01212731 | NA | coding | downstream | 84581 | 1206128 ~ 1212731 (+) |
| CI01000040_01267267_01282224 | NA | coding | downstream | 145720 | 1267267 ~ 1282435 (+) |
| CI01000040_01296612_01311591 | SEPT8, SEPT8A | coding | downstream | 175065 | 1296612 ~ 1311621 (+) |
| CI01000040_01332036_01345122 | FRMD7 | coding | downstream | 210489 | 1332036 ~ 1345156 (+) |
| CI01000040_01399805_01411103 | ATG4A | coding | downstream | 278258 | 1399805 ~ 1411675 (+) |
| G184062 | NA | non-coding | upstream | 104069 | 970765 ~ 971574 (+) |
| G184061 | NA | non-coding | upstream | 110697 | 961089 ~ 964946 (+) |
| G184048 | NA | non-coding | upstream | 144502 | 888079 ~ 931141 (+) |
| CI01000040_00895179_00895620 | NA | non-coding | upstream | 178599 | 895179 ~ 895649 (+) |
| G183981 | NA | non-coding | upstream | 233557 | 841742 ~ 842086 (+) |
| G184086 | NA | non-coding | downstream | 12496 | 1134043 ~ 1150549 (+) |
| G184008 | NA | non-coding | downstream | 22635 | 1144182 ~ 1160977 (+) |
| G184005 | NA | non-coding | downstream | 41295 | 1162842 ~ 1180537 (+) |
| G184022 | NA | non-coding | downstream | 208412 | 1329959 ~ 1351377 (+) |
| G184009 | NA | non-coding | downstream | 227319 | 1348866 ~ 1388236 (+) |
| CI01000040_00240852_00305487 | GABRB2 | other | upstream | 798788 | 240849 ~ 313275 (+) |
| G183420 | NA | other | upstream | 910721 | 157543 ~ 164922 (+) |
| G183366 | NA | other | upstream | 1015246 | 53691 ~ 60397 (+) |
| G184003 | NA | other | downstream | 108745 | 1230292 ~ 1236489 (+) |
| G185296 | NA | other | downstream | 2212031 | 3333578 ~ 3333983 (+) |
| G185884 | NA | other | downstream | 2617440 | 3738987 ~ 3739281 (+) |
| G185947 | NA | other | downstream | 2852218 | 3973765 ~ 3974123 (+) |
| G187510 | NA | other | downstream | 4847498 | 5969045 ~ 5971732 (+) |
