G184022


Basic Information

Item Value
gene id G184022
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 1329959 ~ 1351377 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU208966
TATATAATATATATATNNNNNNNNNNNNNNNATATATATATATATAAAATTAAAGTTGCCAATTAAAAGAAAAACTGAAATTCCCTATAGTTATGAGTCAGAAATGGAGGTAGCTTTTGCACAGCAAAACTCCTCTTGTTTTTCTAGCAGTTTATATCTTGATCTTCATTAACCAGGAGCTGTTTTTGTTTTTTAATGATTGCGTAAATGAGGTATTTCTATTCATTTTGACTGATATGATATGCATGTAATCCCATACAGCAGTTCTGCAATGCTACAATAATAAAGAAATCCCAAACCAAGACGAACAGAAAGGCACTGTTAAACTCCCAAACATATATATTATTGATCATAGTTTAAAATCTATAATAAAGTAATGGATCGGGACGTCAAATACATATAAATAAATGTGAACCAAAAGATTTTGCTAACGCTCTACTTAACCAGTAAGGATATTTTTGTGTCTTTTCAAAGTAAAATGTTGAATAAAATAACAGTAACACACATCCTTGGGCACCAGCAGAAGACTAATATAAAAGCATGTGGCAAAATTGTATAAATACAGTTGAACACACACTATATTTATATATAATATATATTTCCATTCTTTGGGACAAAAAGAGAAGACTTCCTTTTGGTTATGATCAGATAGTGTGTGCGCGTCCGTTCTCTGTACAGGTGTGAGTGTGTTAAGGTGCAGTCATCAGGGCTGACAGCAGATGGTGGTGTTTCCACTAACTCACAGAGAACCTACAGACACAAACACACAGGCAGAGATGAGGATCAAAAACTAGCTATAGATCAGTAAAATGGCCACACTGATATTTGATGCTGAAATGTTCGGCATTGAAGAGGTGTGGCTGCAATAGAGAGCATTTTTATAGAAACTGGCAAATAAAATCAATAATTCCAGCATAAACCTGATAAATAAAGGCCAGTTACTAGAGCAGAAATGCAATGTGGAACAAACATGATCTCACACACACACACACACACACACACACACACTAGTGTTGTTAAAAGTACCGGTACTTCGGTACCAAGTTGGTACTGAAATTTTGAAAATGTGACGATACCAGGATTTCTGTAGTACCAGGAGTACCGAGTATCCGGGTATATTCGGTACCCACTGATAGGGCTGTGGCAGTATTTTACGTGAATATGACACGAGTGAAGCACAAAGCTTTGTTTACAGAAGAAATAATAGGTTAACAATTAAATGTGACATCACAGCCATGGAAACATTTTGGTTCAGGCCGAATGAGAGAGGTCCACACATTTAAGCTTTGTCGGCTTTGTATTCTGTTTAGTGAATCGTGATCTGGTCACCCGATTAGCAGAGAATTTAATAATATTTCATTAGTTATTCCACTGAACATGGAATCTCTGTTTCTTTTCCCAAATCTTCACTCACGCAGGAGATTATAAACGTTTCTTCCTTTGGTTCTCTTTTAATTAGGCCTTATATTCGCATTCTTTACTGTGGTAAAGTAGAAAAAACACTGTAGGACAGAAACCTTTTTGCTTGCACGTCAATCTCTATTTAAAACAGTTTGTGCTTGTTATTAGACTTTATAAGGCGGGTCAAGTTTATTTGTATAGCGCGTTTCACAAACACCGGTGATTTTTACTTTAGCTTTCTCTGGCAGCGCAAAATCAAACACAGCCTGAATGTCTGAAGATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208966 True 1685 lncRNA 0.35 2 1329959 1351377

Neighbor

gene id symbol gene type direction distance location
CI01000040_01296612_01311591 SEPT8, SEPT8A coding upstream 18338 1296612 ~ 1311621 (+)
CI01000040_01267267_01282224 NA coding upstream 47524 1267267 ~ 1282435 (+)
CI01000040_01206296_01212731 NA coding upstream 117228 1206128 ~ 1212731 (+)
CI01000040_01065647_01124429 CAMK2A coding upstream 205530 1065647 ~ 1124429 (+)
CI01000040_01036304_01041594 CDX1B coding upstream 288190 1035474 ~ 1041769 (+)
CI01000040_01399805_01411103 ATG4A coding downstream 48428 1399805 ~ 1411675 (+)
CI01000040_01454703_01458555 GPR185A coding downstream 103326 1454703 ~ 1459283 (+)
CI01000040_01490929_01498480 NA coding downstream 139517 1490894 ~ 1498497 (+)
CI01000040_01535182_01539109 NA coding downstream 183723 1535100 ~ 1539460 (+)
CI01000040_01539717_01540595 NA coding downstream 188213 1539590 ~ 1540649 (+)
G184005 NA non-coding upstream 149422 1162842 ~ 1180537 (+)
G184008 NA non-coding upstream 168982 1144182 ~ 1160977 (+)
G184086 NA non-coding upstream 179410 1134043 ~ 1150549 (+)
G184077 NA non-coding upstream 208412 1075643 ~ 1121547 (+)
G184062 NA non-coding upstream 358385 970765 ~ 971574 (+)
G184112 NA non-coding downstream 20795 1372172 ~ 1393542 (+)
G184117 NA non-coding downstream 73721 1425098 ~ 1425502 (+)
G184124 NA non-coding downstream 85563 1436940 ~ 1437293 (+)
G184127 NA non-coding downstream 89182 1440559 ~ 1440781 (+)
G184161 NA non-coding downstream 172856 1524233 ~ 1530255 (+)
G184003 NA other upstream 93470 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 351796 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 1053104 240849 ~ 313275 (+)
G183420 NA other upstream 1165037 157543 ~ 164922 (+)
G183366 NA other upstream 1269562 53691 ~ 60397 (+)
G185296 NA other downstream 1982201 3333578 ~ 3333983 (+)
G185884 NA other downstream 2387610 3738987 ~ 3739281 (+)
G185947 NA other downstream 2622388 3973765 ~ 3974123 (+)
G187510 NA other downstream 4617668 5969045 ~ 5971732 (+)
G188149 NA other downstream 5457314 6808691 ~ 6809130 (+)

Expression


Co-expression Network