G184127


Basic Information

Item Value
gene id G184127
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 1440559 ~ 1440781 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU209082
ATTTTTCAGAGACAATACCAGCATTGGTCAGTGTGTTCTTCATGATGAAGTCCATCATAAGGCCGAGGTGTAGGCGTCTCTGCAGCTGTCTGGCTGGAAGTGGCAGCAGTTCATCCAGCAGACATTGATCATTGAACACTGGAGGCTCGACACAGGCTGCAGGTGGTGGGTGGACATCAGACTGGACAGAGCTGGATCCGGCTGGCTCTGGTACTCTCGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209082 True 223 lncRNA 0.53 1 1440559 1440781

Neighbor

gene id symbol gene type direction distance location
CI01000040_01399805_01411103 ATG4A coding upstream 28884 1399805 ~ 1411675 (+)
CI01000040_01332036_01345122 FRMD7 coding upstream 95403 1332036 ~ 1345156 (+)
CI01000040_01296612_01311591 SEPT8, SEPT8A coding upstream 128938 1296612 ~ 1311621 (+)
CI01000040_01267267_01282224 NA coding upstream 158124 1267267 ~ 1282435 (+)
CI01000040_01206296_01212731 NA coding upstream 227828 1206128 ~ 1212731 (+)
CI01000040_01454703_01458555 GPR185A coding downstream 13922 1454703 ~ 1459283 (+)
CI01000040_01490929_01498480 NA coding downstream 50113 1490894 ~ 1498497 (+)
CI01000040_01535182_01539109 NA coding downstream 94319 1535100 ~ 1539460 (+)
CI01000040_01539717_01540595 NA coding downstream 98809 1539590 ~ 1540649 (+)
CI01000040_01540821_01545220 NA coding downstream 99973 1540754 ~ 1545260 (+)
G184124 NA non-coding upstream 3266 1436940 ~ 1437293 (+)
G184117 NA non-coding upstream 15057 1425098 ~ 1425502 (+)
G184112 NA non-coding upstream 47017 1372172 ~ 1393542 (+)
G184009 NA non-coding upstream 52323 1348866 ~ 1388236 (+)
G184022 NA non-coding upstream 89182 1329959 ~ 1351377 (+)
G184161 NA non-coding downstream 83452 1524233 ~ 1530255 (+)
G184194 NA non-coding downstream 153528 1594309 ~ 1594820 (+)
G184198 NA non-coding downstream 160215 1600996 ~ 1601249 (+)
G184199 NA non-coding downstream 160933 1601714 ~ 1601944 (+)
G184187 NA non-coding downstream 181768 1622549 ~ 1634932 (+)
G184003 NA other upstream 204070 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 462396 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 1163704 240849 ~ 313275 (+)
G183420 NA other upstream 1275637 157543 ~ 164922 (+)
G183366 NA other upstream 1380162 53691 ~ 60397 (+)
G185296 NA other downstream 1892797 3333578 ~ 3333983 (+)
G185884 NA other downstream 2298206 3738987 ~ 3739281 (+)
G185947 NA other downstream 2532984 3973765 ~ 3974123 (+)
G187510 NA other downstream 4528264 5969045 ~ 5971732 (+)
G188149 NA other downstream 5367910 6808691 ~ 6809130 (+)

Expression


Co-expression Network