G185871


Basic Information

Item Value
gene id G185871
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 3711244 ~ 3711551 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU211098
GTATCAGCTATGCATTCCGTTAATTTTGTGAATTGGTAAGTTTCGTCAGGGCACGAAGAAATATAGAGCTGAGTATCATCAGCGTAACAGTGAAAACTAACGCCATGCTTCCTAATGATATCTCCCAAGGGTAGCATGTACAGAGTGAAAAGCAACGGTCCTAGTACTGAGCCTTGCGGTACTCCATATTGAACTTGTGATCGATATGACATCTCTTTGTTTACTACTACAAACTGATAACGGTCAGATAAGTATGATTTGAACTATGACAATGCAATTCCACTAATGCCAACATAATTTTCGAGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211098 True 308 lncRNA 0.39 1 3711244 3711551

Neighbor

gene id symbol gene type direction distance location
CI01000040_03297317_03298657 DRD1B, DRD1 coding upstream 412348 3296455 ~ 3298896 (+)
CI01000040_03271519_03276006 NA coding upstream 435204 3271063 ~ 3276040 (+)
CI01000040_03212701_03215022 POU4F3 coding upstream 496076 3212701 ~ 3215168 (+)
CI01000040_03168337_03198400 RBM27 coding upstream 512844 3168337 ~ 3198400 (+)
CI01000040_02975088_02975548 NA coding upstream 735298 2975088 ~ 2975946 (+)
CI01000040_03761247_03762668 BOD1, FA44B coding downstream 49610 3761161 ~ 3762674 (+)
CI01000040_03789687_03800746 STC2B coding downstream 77530 3789081 ~ 3800746 (+)
CI01000040_03939728_03943493 RNF121 coding downstream 226757 3938308 ~ 3943624 (+)
CI01000040_04047210_04060876 NA coding downstream 335659 4047210 ~ 4061675 (+)
CI01000040_04063098_04068134 PPP2R2B coding downstream 351396 4062947 ~ 4068198 (+)
G185818 NA non-coding upstream 70487 3561538 ~ 3640757 (+)
G185814 NA non-coding upstream 154883 3556072 ~ 3556361 (+)
G185764 NA non-coding upstream 157136 3495271 ~ 3554108 (+)
G185799 NA non-coding upstream 199990 3508542 ~ 3511254 (+)
G185722 NA non-coding upstream 300096 3410775 ~ 3411148 (+)
G185877 NA non-coding downstream 14434 3725985 ~ 3726235 (+)
G185790 NA non-coding downstream 90668 3802219 ~ 3803713 (+)
G185912 NA non-coding downstream 155070 3866621 ~ 3866854 (+)
G185779 NA non-coding downstream 177873 3889424 ~ 3891659 (+)
G185914 NA non-coding downstream 181728 3893279 ~ 3893481 (+)
G185296 NA other upstream 377261 3333578 ~ 3333983 (+)
G184003 NA other upstream 2474755 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 2733081 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 3434389 240849 ~ 313275 (+)
G183420 NA other upstream 3546322 157543 ~ 164922 (+)
G185884 NA other downstream 27436 3738987 ~ 3739281 (+)
G185947 NA other downstream 262214 3973765 ~ 3974123 (+)
G187510 NA other downstream 2257494 5969045 ~ 5971732 (+)
G188149 NA other downstream 3097140 6808691 ~ 6809130 (+)
CI01000040_06833701_06848731 NA other downstream 3126573 6832987 ~ 6849135 (+)

Expression


Co-expression Network