G185915


Basic Information

Item Value
gene id G185915
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 3893485 ~ 3893687 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU211148
GTGAACTGAAGACGAGAAGCACCAACATGGATCTGGGAATCTGAAGGGTCTGGAAGGATTCTGTATGAAGGAATGGTCTCTGATCTCTTGTCAGGTGTTCTCCAAACTCATCAGGCATTATAGGTGAAGACTCAGAGCTGTTATCTTGGCAAAAGGAGGTTGCAAAAAGTATTGAATAAAAGGGTGTGATTAATTGTGAGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211148 True 203 lncRNA 0.42 1 3893485 3893687

Neighbor

gene id symbol gene type direction distance location
CI01000040_03789687_03800746 STC2B coding upstream 92739 3789081 ~ 3800746 (+)
CI01000040_03761247_03762668 BOD1, FA44B coding upstream 130811 3761161 ~ 3762674 (+)
CI01000040_03297317_03298657 DRD1B, DRD1 coding upstream 594589 3296455 ~ 3298896 (+)
CI01000040_03271519_03276006 NA coding upstream 617445 3271063 ~ 3276040 (+)
CI01000040_03212701_03215022 POU4F3 coding upstream 678317 3212701 ~ 3215168 (+)
CI01000040_03939728_03943493 RNF121 coding downstream 44621 3938308 ~ 3943624 (+)
CI01000040_04047210_04060876 NA coding downstream 153523 4047210 ~ 4061675 (+)
CI01000040_04063098_04068134 PPP2R2B coding downstream 169260 4062947 ~ 4068198 (+)
CI01000040_04369595_04374831 NA coding downstream 474778 4368465 ~ 4375355 (+)
CI01000040_04442810_04474877 MAP4K6 coding downstream 548110 4441797 ~ 4475124 (+)
G185914 NA non-coding upstream 4 3893279 ~ 3893481 (+)
G185779 NA non-coding upstream 1826 3889424 ~ 3891659 (+)
G185912 NA non-coding upstream 26631 3866621 ~ 3866854 (+)
G185790 NA non-coding upstream 89772 3802219 ~ 3803713 (+)
G185877 NA non-coding upstream 167250 3725985 ~ 3726235 (+)
G185788 NA non-coding downstream 19623 3913310 ~ 3914476 (+)
G185791 NA non-coding downstream 20898 3914585 ~ 3915460 (+)
G185938 NA non-coding downstream 73515 3967202 ~ 3967422 (+)
G185955 NA non-coding downstream 95993 3989680 ~ 3989921 (+)
G185959 NA non-coding downstream 115381 4009068 ~ 4009291 (+)
G185884 NA other upstream 154204 3738987 ~ 3739281 (+)
G185296 NA other upstream 559502 3333578 ~ 3333983 (+)
G184003 NA other upstream 2656996 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 2915322 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 3616630 240849 ~ 313275 (+)
G185947 NA other downstream 80078 3973765 ~ 3974123 (+)
G187510 NA other downstream 2075358 5969045 ~ 5971732 (+)
G188149 NA other downstream 2915004 6808691 ~ 6809130 (+)
CI01000040_06833701_06848731 NA other downstream 2944437 6832987 ~ 6849135 (+)

Expression


Co-expression Network