G185938


Basic Information

Item Value
gene id G185938
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 3967202 ~ 3967422 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU211176
AATCCAAACGCGGAAGCACAGAGGATAGAGCAAAACAAAACACCGGTCACGAATTAAAAGTCTAAAACGAGAATTTTTAAAGAGAAATATCGGAGGATTTTGATATAAGAGGAGCTTGAGTTTGTTGCCCAGCCCTATTTGTTTGAACCATGAGAGATGTCCTACATCCTACATCATACACCATGTCACGGGTTACTCTTGTGCAGTCATCTGGAGGAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU211176 True 221 lncRNA 0.42 1 3967202 3967422

Neighbor

gene id symbol gene type direction distance location
CI01000040_03939728_03943493 RNF121 coding upstream 23578 3938308 ~ 3943624 (+)
CI01000040_03789687_03800746 STC2B coding upstream 166456 3789081 ~ 3800746 (+)
CI01000040_03761247_03762668 BOD1, FA44B coding upstream 204528 3761161 ~ 3762674 (+)
CI01000040_03297317_03298657 DRD1B, DRD1 coding upstream 668306 3296455 ~ 3298896 (+)
CI01000040_03271519_03276006 NA coding upstream 691162 3271063 ~ 3276040 (+)
CI01000040_04047210_04060876 NA coding downstream 79788 4047210 ~ 4061675 (+)
CI01000040_04063098_04068134 PPP2R2B coding downstream 95525 4062947 ~ 4068198 (+)
CI01000040_04369595_04374831 NA coding downstream 401043 4368465 ~ 4375355 (+)
CI01000040_04442810_04474877 MAP4K6 coding downstream 474375 4441797 ~ 4475124 (+)
CI01000040_04475476_04499896 NA coding downstream 507890 4475312 ~ 4500113 (+)
G185791 NA non-coding upstream 51742 3914585 ~ 3915460 (+)
G185788 NA non-coding upstream 52726 3913310 ~ 3914476 (+)
G185915 NA non-coding upstream 73515 3893485 ~ 3893687 (+)
G185914 NA non-coding upstream 73721 3893279 ~ 3893481 (+)
G185779 NA non-coding upstream 75543 3889424 ~ 3891659 (+)
G185955 NA non-coding downstream 22258 3989680 ~ 3989921 (+)
G185959 NA non-coding downstream 41646 4009068 ~ 4009291 (+)
G186041 NA non-coding downstream 246694 4214116 ~ 4226490 (+)
G186057 NA non-coding downstream 272644 4240066 ~ 4240279 (+)
G186064 NA non-coding downstream 284620 4252042 ~ 4252331 (+)
G185884 NA other upstream 227921 3738987 ~ 3739281 (+)
G185296 NA other upstream 633219 3333578 ~ 3333983 (+)
G184003 NA other upstream 2730713 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 2989039 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 3690347 240849 ~ 313275 (+)
G185947 NA other downstream 6343 3973765 ~ 3974123 (+)
G187510 NA other downstream 2001623 5969045 ~ 5971732 (+)
G188149 NA other downstream 2841269 6808691 ~ 6809130 (+)
CI01000040_06833701_06848731 NA other downstream 2870702 6832987 ~ 6849135 (+)

Expression


Co-expression Network