CI01000043_00040385_00051009 (RASGRP2)


Basic Information

Item Value
gene id CI01000043_00040385_00051009
gene name RASGRP2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 40327 ~ 51009 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_00040385_00051009.mRNA
GTATAAATGGAAACGACAAGTTACCCAAAGAGTTCCATCAATGTCAAAAAAGAGAAAAATGTCCCTTTTGTTTGATCACCTGGACCCTTGTGAGCTTGCTGAACATCTGACCTATCTGGAGTACAAATCTTTCTGCAAGATAATGGATTACCACAGCTTTGTGATGCACGGCTGTACAGTAGATAACCCAATTCTGGAGAGGTTTATTACACTCTTTAACAGCGTCTCACAATGGATTCAGCTGATGGTTCTCAGCAAACCCACTGCCCCGCAGAGAGCTGCCGTGATTGCACACTTCATACAGCTCGCACAGAAACTACTGCAGTTGCAGAATTTCAACACGTTGATGGCGGTGGTCGGGGGTCTCAGTAATACCTCCATCTCTAGGCTGAAGGAGACACAGGCACACATCAGCAATGAAACCAATAAGACAGTATCAATTTCAGAATATCTCTCTCAGATCTTTAACAGTTTGTTGGACCTGGTGACATCTTGTGGTAACTACAGCCAATACCGGCGCCGATTCGCTGAATGCACTGGATTTCGTTTTCCAATCCTGGCTGTTAACCTCAAGGACTTGATAGCCGTTCATGTTGCTCTGCCCGACTGGACAGACAAACAGAAGACTCGTGTCAACTTGGCCAAAACTCAGCAGCTCTATGCGATCCTGCAGGAATTAGCCCTCGTGCAGAACACTCCCCCAAACATTGAGGCCAACACAGACTTGCTCAATCTACTTACAGTGTCACTGGATCAGTACCACACAGAAGAGGAGATTTATCAGCTCTCATTACAGAGAGAACCCAGAGCTGCAAAACCTGCGAACTCAACACCTTCCTCCAGTCCAGCTCCTAAACAGCTATCAATGATTGATGAATGGGCAGCATCAGTGAAGCCTAAAGCTAATCCTGTTATTATCAGCAAACATATCGAGAAGATGGTGGATTCTGTGTTCAAGAATTTTGACTCAAACGGTGATGGCTTCATCTCACGTGAAGAGTTTGAGTGCATCAGGAATAATTTTCCATATCTCAGCAAGTTTGGAGAACTCGATAAAAATCAGGATGGAAAGATCAGCAGGGAGGAGATGATAGATTATTTTATGAAGGCCAGTTCTTTGCTCAATTGTAAGATGGGCTTCATACACACCTTTATAGAGACCACATACGTGAAACCCACCTTCTGCGAACACTGCACCGGCTTTATATGGGGCTTTTATAAACAAGGATACAAATGCAAAG

Function

symbol description
rasgrp2 Predicted to enable calcium ion binding activity and guanyl-nucleotide exchange factor activity. Predicted to act upstream of or within small GTPase mediated signal transduction. Human ortholog(s) of this gene implicated in platelet-type bleeding disorder 18. Orthologous to human RASGRP2 (RAS guanyl releasing protein 2).

GO: NA

KEGG:

id description
K12361 RASGRP2; RAS guanyl-releasing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_00040385_00051009.mRNA True 1241 mRNA 0.44 9 40327 51009

Neighbor

gene id symbol gene type direction distance location
CI01000043_00093397_00132783 SIPA1 coding downstream 41835 92844 ~ 133473 (+)
CI01000043_00174845_00175959 NA coding downstream 121286 172295 ~ 176065 (+)
CI01000043_00176126_00193756 NA coding downstream 125067 176076 ~ 194186 (+)
CI01000043_00372873_00405272 CACNB2, CACNB2A, CACB2 coding downstream 321864 372873 ~ 405425 (+)
CI01000043_00449493_00494730 MYOM1B, MYOM1 coding downstream 398484 449493 ~ 494730 (+)
G189243 NA non-coding downstream 28386 79395 ~ 137014 (+)
G189236 NA non-coding downstream 155970 206979 ~ 208995 (+)
G189240 NA non-coding downstream 159430 210439 ~ 215709 (+)
G189262 NA non-coding downstream 177811 228820 ~ 229240 (+)
G189245 NA non-coding downstream 183120 234129 ~ 235612 (+)
G190241 NA other downstream 1632547 1683556 ~ 1692479 (+)
G190272 NA other downstream 2390853 2441862 ~ 2443710 (+)
G191670 NA other downstream 3852224 3903233 ~ 3909966 (+)
G191644 NA other downstream 4256939 4307948 ~ 4350614 (+)
G192454 NA other downstream 4942004 4993013 ~ 4993356 (+)

Expression


Co-expression Network