CI01000043_00174845_00175959


Basic Information

Item Value
gene id CI01000043_00174845_00175959
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 172295 ~ 176065 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_00174845_00175959.mRNA
CTATAAATATAATTGGGTTCTGTCATCAATAAAGTTCATATTCCTCAGTCAGACTGTATATTTTGCCTGAACATGCAACTAGTCCACCACACATTCAAATAAATTGGTTTGAAAAATCCAACAAGCACAACTGTTTCTAATGATTCCATGTCCATACCATGTGGTATCTTCCCATTAGCAATTCATGAGTTCCCTGAGGACATCTTCACCAAAGAACAGCGAAAGAGAGGTGCCATACTACTACACGTGCTATGTGTGAGTGAGATGCATCTATCTATCTATCTATCTATCTATGTATTTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCATCCATCTTCTCTCTTCTCGTTGCAGGCCATCTATATGTTCTACGCACTTGCTATTGTTTGCGATGACTTTTTTGTCCCCTCCCTGGAGAAGATCTCAGAGGTGAGTCTAGCCACCTGTCAGACATTTCAGCTGGAATAAGAATGACAACACGTTACTTTTGCCATTCCTTAGAAAACTAAGTGATGACAGCCTTGTTTCCCTGCTCCCATGGGTCAGCACTGATGCTATGTGTCATGAACTCTGTGTAAAGTGTTAATTAACACATCAAGAATGAAGGTGTGTTTCCTTTTGGGAAATTCCCTTTGTTCATGTTCCTTTAGGAAATTCCCTTTGTTCACAATTTGACAGATTTTAAGAATTTTGTCCTTTAAAACAACAGAGATTCATGCTACTGGGAACCTTTGTGAAAAAGAAGTAAACTTAGCATACTTTTAAAAAGAGTACTTATGGAAATAATATGCTTTTAAAAAAAATACACATAAGTTCGAACTGAATGCAATGTTTTTGGACATTTAACTGCATATTAATTGCAATTCAATGAAAATGCATTATAGTTTAAATTAAACCTGGTTGTGCTTTGGCTTGACCTTTCCAATGCCTACAGTTCAATACTAGTTGAGACTGTCTTGAATCGACACAATGGTGGCATATACAAAACATTTTTAACGGGCCCCAAACAACAAGTGCAACAAAGAGGCATTTATGCTGCACGTATTATGAAAATACCATGCCAAACACATTGCTTCACAAAGGACATTTATATCTAAAAAAAAAAAAAAAAAAAAAAAAGTACTCTCTCTGTTAAGTAGTGATGCACGAATCGCGGTTATATCAAAGACTATAGAATAACACAAGACGCGCCACTTGTATTGTTTTGAATGGGAGAAAGTGCAATGTGCAATATGGCGGAATAAATCCCACCTTATAAATAAGAGCCAATCGCCGACTGGTAAAGTCATTGCGTCACTGCAGCAGCCGTTAGAAGCTCCGGTTCCTATAGAAACAGTCAGCCGCACGCTTCCTATAGAGATGCACACTTAGTACTGCGCATGCACATTAGTTTGATCCAGCTTGAAAAATACCGTTTTTTGTCATGATTCGAGCGTTTAAAAACATAATTTATGAGACAGTTGTTGTCAGACTTCATTGGTGATTTCAAATATGAAATTTAATCAAAAGCTTGGCAAACAGCTTTGGAGAATTTTTATGTTTCCCCATTCAAAGAGATAGGAGCTGCACTTGCATGCCCGAGAGGCTTTTCAAAGATGGCCGCCGAGTGAAATGACTTGTCTTAAAGGGACAAAACCGATCCTAGAGAAATGTGAAATTTCAAAAACATAACAAAAGGAATAATAATAATAATAACAATTTTTATTTATATAGCGCCTTTCCAGGGCTCAAGGACGCTTTACAATGTACATTTAACAAGGAAGAAATAATACAAGTAGAGTAGACAATGATGACAAACAATAGTTAGAAGATACAGTAAAGGAACATTATATGGACAGGACAGCATACTTCCATACAGGAAGTAAAGAACCTTGTGGGAGCGTTTTAGTGAAGTAGTTAACCAGGACAAATCAAGTGCTGGGTATGTGATATGCAATGGCTGTTTAAACACCTGATGCGATGCAGAGACTAGAATGGTAAAAATGATGGGTTATTTTGTCTACAGGTCATTAGAGCTAGCATTCTACTCGCTTTAAATCAGACACGGAGATAAAGTAGATAAGATTGCATTTATTTGAATGAATAGAGAGAGAGAGATTGAGATTGTGCGTGTGAATTACCTTCGTCTATGCAGTGTCTCTTTATTAATAGTGAAGCTGTGTGTTAAATTACTTTAAAAAAACAGTGACGTTACCACCTTGTTGCTGAGAAGTATAATGTAGCGTTTCAGTAGTGAAGCTATTTTAATAAAAAAAGGTGTGGGCAGTGTTTACAACAGGTTTCTGTGCTCCTGAATGTTTCTGTGTGTACGATGCACCATCTCTTATCTCTGTATGTGAGTAACTGTCAGTATGTGTGTGCATGTGCACAAACGCTACGCCACTGTACCCAGTAAGATCAAGGGTCTCAACCTGAACTAAAACAAGAACTTAGGCTCAGGGTCACTTCAGGGAATGTAGCATCAGATTGGCATCAACTTGAAAAGGGGATTATAAGGCATACCATTTCAGTTATTCTTTTCACTTTTGCCATGAATATGCTGGTTAAGATGGCAGAAAATGAGTGCAGAGGCCCTTTGTCTAAGTCTGGTATTGAACAGCTACCGATCAGAGCTTTTATGGATGACCTCACTGTTACTGCATCATCAGTGGCTGGTGGTAGGGGGATCCTTCAGTGCCTGGAAAAGCTCATCTCCTGGGCAAGGATGAGTTTTAAACCTGCCAAATCCAGGGCCATGGCGCTAAAGAGGGTTAAGGAGCTCGAAAACTGGCTCACCACAGTGGACAAGTCTGGCCCACCTGGCAGGTTCAAAGCTTGGATTTACCAACATGGTATTTTACCTCGAGTTCTCTGGCCTCTGCTGGTGTATGAAGTAACTCTATCAACAGTGGACATATTGGAGAGGAAGAGGGCATTTGTGGGCACAGTGGCGACAGTAAAGGCAGGGCTGGGAGCTATCCCACAGCCATGTTATGACAAGGCCTGGGTAGGGATAGATCAAGATGGTGGTGATGCGGCAGCAGGGTGCTTGGACAAGGCAGAACCTCAGCGGCTTAAATTCTTAGTCCAAGCCTACCCAGCCCAAATGATCTCCACATCTGGAGCAAGAACGATTCCCCGGTATGCCCGCTGTGCCCTGGAAGAGGCTCACTCGAGCACATCCTCAGTAGCCATCCAAAAGCCCTGGGCCTGTTACCGCTGGTGACATGACCAGGTTTGCAGTTGCAGATGCCATCACCAGTAACAAGCAGATCCACAGCCAGAGAAACACTGCCTTTGGAAGGGCTGGTGCGCAGCTGCAGTTAGAGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_00174845_00175959.mRNA True 3331 mRNA 0.41 4 172295 176065

Neighbor

gene id symbol gene type direction distance location
CI01000043_00093397_00132783 SIPA1 coding upstream 38822 92844 ~ 133473 (+)
CI01000043_00040385_00051009 RASGRP2 coding upstream 121286 40327 ~ 51009 (+)
CI01000043_00176126_00193756 NA coding downstream 11 176076 ~ 194186 (+)
CI01000043_00372873_00405272 CACNB2, CACNB2A, CACB2 coding downstream 196808 372873 ~ 405425 (+)
CI01000043_00449493_00494730 MYOM1B, MYOM1 coding downstream 273428 449493 ~ 494730 (+)
CI01000043_00529899_00530472 NA coding downstream 353783 529848 ~ 530885 (+)
CI01000043_00613106_00620046 METTL4 coding downstream 437041 613106 ~ 620487 (+)
G189243 NA non-coding upstream 35281 79395 ~ 137014 (+)
G189236 NA non-coding downstream 30914 206979 ~ 208995 (+)
G189240 NA non-coding downstream 34374 210439 ~ 215709 (+)
G189262 NA non-coding downstream 52755 228820 ~ 229240 (+)
G189245 NA non-coding downstream 58064 234129 ~ 235612 (+)
G189296 NA non-coding downstream 124739 300804 ~ 347407 (+)
G190241 NA other downstream 1507491 1683556 ~ 1692479 (+)
G190272 NA other downstream 2265797 2441862 ~ 2443710 (+)
G191670 NA other downstream 3727168 3903233 ~ 3909966 (+)
G191644 NA other downstream 4131883 4307948 ~ 4350614 (+)
G192454 NA other downstream 4816948 4993013 ~ 4993356 (+)

Expression


Co-expression Network