CI01000043_00449493_00494730 (MYOM1B, MYOM1)


Basic Information

Item Value
gene id CI01000043_00449493_00494730
gene name MYOM1B, MYOM1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 449493 ~ 494730 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_00449493_00494730.mRNA
GACCACTGAGGCGATTAACCTCCTTCCCACTCACTCCCTTAACATTTTTCAACTTAACAGTCTTTCTTCTTGACACCACACCCCTTTCCAAAATAATAATAGTGTGTGAAAGAAATGCTGGATACTCACGATATGTGTGTATGTTGCCATTTCTACATTATTGTAGCATTAGAGCTGCCACATACACGTCTCTAGAAGAGGGGGGGATTAGCCCTCTGCCCAAGAGGGCCAAGCCAACCTATCTTGCCATGGACAAGGAGAACCAGATCATCGGTTATGTGGTGCCCATCTTCAGGGGCAGTCGTGAGTTTGAAAGTGGCCTATCAGACACTGAGGAAGCACGTGCTAAAGAGAGTGCTGGCTATCTGGCACGGCGTGACCTCTTCACTAGGGGTGTGGAGTCGGAGCGCATCGAACACAAGTCCCGCAGAACCATCATGAGGGAGTCCGCAGAGCGCATCTCCCTTAGCAAGAGGGGGTGTAACGATATTCAAACCAAACCGAAAAACCTTGATACACCACCCACGATCCATGAGAACGAAGAGTACCATAAGCGTATGAACGAGGACAGCCTGATGCACACGCCCGAGTTTGTGACCAAGCCACGTTCCCACACTGTTTGGGAGAAACAGTGTGTGAGGCTGCACTGTACCATCTCAGGATGGCCTGAACCACGCGTTGTGTGGTACAAGAACAATGTTAGCATTGATCCTATGTCCAAGCCAGGGAAGTACAAATTGGAGAGCAGCTATAATGTCCACTCCCTGGAGATTAACAGGTGTGATTTTGATGACACCGCACAATATCGAGTGTCAGCCATGAACAGCAAGGGCGAGAACTCTGCTTTTGCTTCTGTTGTCGTCAAAACACCTTGTCTGGAGTATGGTATAACATTCGAGACGCACATTGTGGAGAAGTTTGGTGTGTCTTTTGGACGTGAGGGTGAGACGTTGAGTTTGGGCTGCTCTGTTATCATCTATCCTTCACTGCAACGCTTCCAGCCTGAGATAGAGTGGTACAGAGATGATAAACTGCTGGTGCCATCAAAATGGGTTCAGATGCACTGGAGCGGCGACAGAGCTACACTCACTCTCACACACCTCAACAAGGAGGATGAGGGGCTGTACACACTTCGTGTCATAACCAAGTCTAGCTTTGAGACACATTCTGCGTATGTCTTTGTCAGAGATTCTGATGCTGAGGTTGCGGGTGCTCCTGGTGCTCCTTTAGATGTACATTGTCAGGATGCCAATAAGGATTATGTCATCGTTACCTGGAAACAGCCTGCTGTGGACGGCGGAAGTTCCATTTTGGGCTACTTTGTTGATAGGTGTGAAGTTGGCACTACACACTGGGCACAATGTAACGACACTCCTGTTAAGTTTGCACGTTTCCCTGTAACTGGTCTTGTGGAAGGGCGAAGCTATGTGTTCCGCGTGCGTGCCGTAAATAAGGCTGGTATGAGCCATCCATCACGTGTATCTGAACCAGTAGCCGCTATGGACCCTGCAGACCGCACAAGAAAAGGTGCCTCTGCTCCTTGGACTGGACAAATAATTGTTACTGAGGAGGAGCCTGTGGAGGGAGTGGTTCCTGGCAGACCTCGTGACCTCACAGTCATTGAAGCCACTAAAAACTATGTGGTGTTGAGCTGGAAGCCCCCAGGCGATAAGGGCCATGAAGGGGTTATGTATTACGTGGAGAAGGGCAAGTCTTATTGCTTCCGTGTTCGTTGCTGCAACTCAGCTGGTGTTGGAGAACCATCAGATCCGACCGAAGCCACCACGGTTGGGGACAAGCTAGATATCCCATCAGCCCCTGGCCGTGTGGTGCCTACCCGCAATACAGACACATCTGTGGTGGTTTCATGGGAAGGGTCACGTGAAGCTAAAGAGCTGGTGGGCTACTACATTGAGGACAGTATTGTGGGGAGCAAAACTTGGGAGCCATGCAACAACAAACCAGTTAAAGGCACAAGAAGATTGACAGGCAACTGTCTGGGCCCCAACAAAGATGGCGGTTCCTGCCCCATCTTGGATCTGGGACCGCTGAATCATGCAGTCAAAGCGTTCATTCAAATAAGCGTCCTGAAACAGACCCTCGTTCATATTGGCCAAGGGACTGGATTATATCAGTTTGTCTGTCATGGCTTGACCACAGGCGAGAGTTACATTTTCCGAGTGAGAGCAGTCAATGCTGCGGGAATCAGTGAATTCTCACAAGAATCTGAAGCCATTAAAGTTAAAGCTGCAATTGGGGGCGGTATTCTTCATGGTGTGTGTCTGGAGTCAGGGGGTAATGGGGTCGGACTAACCCAGCACAGCACTTGTGGAGTGGGCAGGCATGTGGCGCCTCACTCCCCTGTTGACACGCCTCTAACACGCCTAGCTAATGTTAGTGAAAGGGTTGAGGGAGGGGGTCAAAACACTGGCCACAAAGGGCATCCAGTTGCATTAAATGAAGGAAAACAGGGCAAGAGGGCCAGTCAGGGGGCACCAGAACCTTCTCGTGGGCAGGATACTGAAACCTCTAAACTGGTTGCAAACTCTAGCAATGAATTGTTAATGCCCAACTACATCCAAAAGGAGTTGGCAACAGAATTGCCAGAAAATTGTAAGTCGTCAATAAACTCTTCTCCGGAACAAGAGAAAGCAGGAGAGCGAGAGAGAGGACGAAAAGGCTCAGCTTCACCCGCTCCACCCTATGGCATCAATGTGTTGGAATGTGTGCGGGACTCGATGGTACTAGCCTGGAAACAACCCACTTTCATCGGTGGTGCTGACATCACTGGTTACTTTGTTGATTACCGTGAGGTCATCGGTGGAGTCCCGGGAAAATGGCATGAAGCGAACATTAAGTCTGTCAGTGAGAGAGCTTATAGAGTTTCAGAGCTGAAGGAAAACATGCTGTACCAATTCCAGGTACGTGCTGCCAACATGGCTGGTGTGGGCATCCCGTCTCTTCCCAGTGAGACATTCAAGTGTGAGGAGTGGACTATTGCTGTACCGGGACCACCCCATGACCTCCAAGTACGGGAGGTGCGTAAAGACTCTTTGGTCTTGCTCTGGAAACCACCTGTCTACCAGGGTCGTGATGCTGTCAATGGATACTACATTGACATCAAGGAGGCTGAAGCGGACTTTGAAATGTGGAGAGGGGTCAATGAGAAAGCTACTAACAAGACATTCATGAAGATCAAGGATCTAAAGGAGGGGGAGTCGTATGTTTTCCGTGTACGCGCTCAGAACAAGGCTGGTGTAGGAAAAGCATCAGAAGCTACAGAACCAGTGGAGGCAGTGACTAAACCAGGTACTGCAGAGATAGTTGTGAATGTTGATGACGATGGCGTCATTTCACTGAATTTTGAGTGCTCTAACCTCACTGCTGACTCCAAATTTGTCTGGTCCAAGAACTATGAGGAAATGACAGAACCTAAACGCATGACCTTAGAGACCAAGGGTAGCAAGTCCAAAGCCATATTTAATACTCCTTCAGAAGATGACCTGGGCATCTACTCTTGCTTCGTGACACACACTGATGGAGCTTCAGGCAGCTACACGCTCTCTGAAGAAGCTCTAAAAGAACTCCTGAAGGTCAGCCATGAACACAAATTCCCCATCATCCCTCTGAAAACAGAGCTGGCCGTAGAGCTGCTGGAGAAGGGTAGAGTTCGCTTCTGGTTGCAGGCTGAAAAAATCTCTGCCAATGGAAAAGTTGAATACGTGTTCAATGACAATATGATCTCCCAGGGAGAGAAATACAAGATGAACTTTGATAAAAATACTGGCATTATTGAGATGTTCATGGAGTCTCTGGGCAAAGAGGATGAGGGAACATTCACTTTCCAGCTTCAAGATGGCAAAGCCACTAACCAGTCCAGTCTAGTGCTAATTGGAGATGTGTTCAAGCAGTTACAGAAGGAATCAGAGTTCCAGAGAAAAGAATGGCATAGAAAGCAAGGTCCACACTTTGTGGAGTATCTTGGTTATGAAGTCACACCTGAGTGCTGTGTAAGACTGAAGTGCAAGGTTGGTAATATGAAGAAAGACTCCGTGGCCCTGTGGTATAAGGATGGACGAGAGGTTAAGGTCAATGAGAAACTGGATTTCTCTGAAGGAGTATTAACTTTGGAGATCACCCAGATCTCGAAAAAGGATGCTGGTATATATGAAGTAGTTTTGAAGGATGACAGAGGCAAAGACACCTCCACCCTCAACCTTACTGACCAAGGATTCAAAGACCTGATGAATCAGGTTTTCAGTGTTATTGCGAACTCGTCCACTCCGCTGAAGATCCAGAGCACAGAGGAGGGAATCAGGCTCTACAGCTTCGTCAGCTACTACAATGACGAGCTGCACGTCACCTGGCATCACAAGGATGCTGCAATCGCATTCACCGAGCGCATTAAGAGTGGTGTGGTGGGTGAGCAGCTGTGGCTGCAGATTTCTGAGCCCACAGAGAAAGATAAAGGCAAATACGCCATTGAGTTCTTCGATGGGAAAGGAGGTTTGCGCAGAACTGTGGAATTGGCTGGACAAGCATTTGATGATGCATATGCTGAATTTCAAAGACTCAAGGCTGCTGCTATTGCAGAAAGAAATCGTGCTCGTGTGGCAGGTGGTTTGCCTGATGTTGTGACCATCCAAGAGGGCAAGGCTTTGAACCTGACCTGCAATATCTCGGGTGACCCTGTACCAGAGGTCACTTGGCTAAAGAATGAACGTGAGATGGTTTCGGACGATCACTATATTCTGAAGTTTGAGTCAGGCAAGTTTGCCAGTTTCACCATCACCAGCGTCAATACGTCTGACTCTGGCAAGTACAGCATCCTGGTAAAGAACAAGTACGGTACGGAGAGCGGCGATTTCACCTTGAATGCGATCGAAAGCATGGGTGATTTTGGTGTGGTGTCATATCTGGCTGATGCAGATGGAAACGTGAACATTGGACCTGCGACTCCTGTACCCGCTTGTCGTTCAACAAAGTCTTCAACCAGATCAATTCCCACAACACCCACCACAGTCACTCCAACTCAAACACCAACCCCAGCTAATCCAACCCCCCAAAATAAAACTACAGATACCCCGACTCCCGAAAATCAAACCCCAAGTACACCAACTCCATCAACCCCACCAACTAAAATCCCAGAAAATCATTCTCCAGGTACCCCGACTCCTCAAAGTCAAACCTCAGATACCCCTATTCTCCAACACCCAGCTAATCCGACTTCCTCAATCTCAAATACATCCACTCCTCAACCCTTCACTCCCACACCAGGTGAGAAATCTGCAAATAACTCAATGGATGATAAGAAGATAACAGCAATGCTGGAAG

Function

symbol description
myom1b Predicted to enable actin filament binding activity and kinase binding activity. Predicted to be involved in muscle contraction. Predicted to be active in M band. Is expressed in female organism. Orthologous to human MYOM1 (myomesin 1).
myom1 Enables identical protein binding activity and kinase binding activity. Involved in positive regulation of gene expression; positive regulation of protein secretion; and protein kinase A signaling. Predicted to be located in sarcomere. Predicted to be active in M band.

NR:

description
Myomesin-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_00449493_00494730.mRNA True 5334 mRNA 0.48 38 449493 494730

Neighbor

gene id symbol gene type direction distance location
CI01000043_00372873_00405272 CACNB2, CACNB2A, CACB2 coding upstream 44068 372873 ~ 405425 (+)
CI01000043_00176126_00193756 NA coding upstream 255307 176076 ~ 194186 (+)
CI01000043_00174845_00175959 NA coding upstream 273428 172295 ~ 176065 (+)
CI01000043_00093397_00132783 SIPA1 coding upstream 316020 92844 ~ 133473 (+)
CI01000043_00040385_00051009 RASGRP2 coding upstream 398484 40327 ~ 51009 (+)
CI01000043_00529899_00530472 NA coding downstream 35118 529848 ~ 530885 (+)
CI01000043_00613106_00620046 METTL4 coding downstream 118376 613106 ~ 620487 (+)
CI01000043_00670862_00685333 ACER2 coding downstream 174763 669493 ~ 686239 (+)
CI01000043_00700044_00705027 NA coding downstream 204407 699137 ~ 705201 (+)
CI01000043_00713100_00730032 ACO1 coding downstream 218370 713100 ~ 732043 (+)
G189288 NA non-coding upstream 11254 437503 ~ 438239 (+)
G189281 NA non-coding upstream 18774 427230 ~ 430719 (+)
G189340 NA non-coding upstream 34793 413873 ~ 414700 (+)
G189334 NA non-coding upstream 98046 351079 ~ 351447 (+)
G189296 NA non-coding upstream 102086 300804 ~ 347407 (+)
G189289 NA non-coding downstream 30990 525720 ~ 527581 (+)
G189383 NA non-coding downstream 68924 563654 ~ 565387 (+)
G189384 NA non-coding downstream 69115 563845 ~ 595280 (+)
G189377 NA non-coding downstream 90554 585284 ~ 587468 (+)
G189376 NA non-coding downstream 95358 590088 ~ 591256 (+)
G190241 NA other downstream 1188826 1683556 ~ 1692479 (+)
G190272 NA other downstream 1947132 2441862 ~ 2443710 (+)
G191670 NA other downstream 3408503 3903233 ~ 3909966 (+)
G191644 NA other downstream 3813218 4307948 ~ 4350614 (+)
G192454 NA other downstream 4498283 4993013 ~ 4993356 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00019682 NA coding CM030124.1 CM030124.1 37238889 ~ 37309104 (-)