CI01000043_00529899_00530472


Basic Information

Item Value
gene id CI01000043_00529899_00530472
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 529848 ~ 530885 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_00529899_00530472.mRNA
TTATAAAATTACTTGACAAATTAACATTGTGTTTTAGAACCATGTAAAACTATGGTAACTGGTGGTACACAGGAGAGGAATCTTGTTCTGATCCATGCTGATGTCATTAGTGCCTGCACTCTGGGATGTTTGACAGGGGTATCTGCTATTTGTGCTGATAATGGAGGAATGGAGGTGCCCAGAAGTGGTGTGGGGGAAGAAGAGAAGATATTTGACCTTCTGGTGTTGGTGTTGCAGGCCTCTGTATAGCAGTAAGGGGACTGTATGGTCTACATAGTTAGTATAATTCTGGTTCCACATCCTCCCGAGTCATATTCATGTTCACTGGTTTATCAGTATATATAGGCGATCCACACTCCAATCCAGAAGGGGGCATACATGGTAATACAACAATGTTTGCTAACCGCTACAACAGGAAAAAGAGCAGAAGAACAGCGCATACGCGAATGACTTGAGCACATGAAAACAAAGTCAACAAGGCAGTGTGCATGTGTCGAATGAATCTTTCTGCACTCATGGACAAAGGAGAATACTTTGAAAGGCTCGCACACTCAACTGTGCATGAAACGTAGCGAAACGCGGGAAATTAAAGTATAGGAGAGTTGGGCTTAAGCTTTGAATGTTTACATATATTTTAACTGGAGCAAATTGTGACACTCCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_00529899_00530472.mRNA True 662 mRNA 0.42 2 529848 530885

Neighbor

gene id symbol gene type direction distance location
CI01000043_00449493_00494730 MYOM1B, MYOM1 coding upstream 35118 449493 ~ 494730 (+)
CI01000043_00372873_00405272 CACNB2, CACNB2A, CACB2 coding upstream 124423 372873 ~ 405425 (+)
CI01000043_00176126_00193756 NA coding upstream 335662 176076 ~ 194186 (+)
CI01000043_00174845_00175959 NA coding upstream 353783 172295 ~ 176065 (+)
CI01000043_00093397_00132783 SIPA1 coding upstream 396375 92844 ~ 133473 (+)
CI01000043_00613106_00620046 METTL4 coding downstream 82221 613106 ~ 620487 (+)
CI01000043_00670862_00685333 ACER2 coding downstream 138608 669493 ~ 686239 (+)
CI01000043_00700044_00705027 NA coding downstream 168252 699137 ~ 705201 (+)
CI01000043_00713100_00730032 ACO1 coding downstream 182215 713100 ~ 732043 (+)
CI01000043_00732508_00746912 SEPSECS coding downstream 201623 732508 ~ 748167 (+)
G189289 NA non-coding upstream 2267 525720 ~ 527581 (+)
G189288 NA non-coding upstream 91609 437503 ~ 438239 (+)
G189281 NA non-coding upstream 99129 427230 ~ 430719 (+)
G189340 NA non-coding upstream 115148 413873 ~ 414700 (+)
G189334 NA non-coding upstream 178401 351079 ~ 351447 (+)
G189383 NA non-coding downstream 32769 563654 ~ 565387 (+)
G189384 NA non-coding downstream 32960 563845 ~ 595280 (+)
G189377 NA non-coding downstream 54399 585284 ~ 587468 (+)
G189376 NA non-coding downstream 59203 590088 ~ 591256 (+)
G189374 NA non-coding downstream 72016 602901 ~ 603278 (+)
G190241 NA other downstream 1152671 1683556 ~ 1692479 (+)
G190272 NA other downstream 1910977 2441862 ~ 2443710 (+)
G191670 NA other downstream 3372348 3903233 ~ 3909966 (+)
G191644 NA other downstream 3777063 4307948 ~ 4350614 (+)
G192454 NA other downstream 4462128 4993013 ~ 4993356 (+)

Expression


Co-expression Network