CI01000043_00713100_00730032 (ACO1)


Basic Information

Item Value
gene id CI01000043_00713100_00730032
gene name ACO1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 713100 ~ 732043 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_00713100_00730032.mRNA
ACCAACTTCCCTTCTCCATCCGTGTGCTGTTGGAGTCTGCGGTTAGGAACTGTGATGAGTTCCTGGTGAAGAAGGAGGATGTGGAGAAAATCCTCAACTGGAAGGTGACGCAGAGTCAGACTGTGGAGGTGCCTTTCAGACCGGCCCGCGTCATCTTGCAAGACTTCACGGGGGTTCCTGCAGTGGTCGACTTTGCAGCCATGCGTGATGCAGTGAAAAAGTTACAGGGCGACCCTGAGAAGATAAATCCAGTTTGTCCGGCAGACCTTGTCATAGATCATTCCATTCAGGTTGACTTTAACAGGAAGTCTGACAGTGTTCAGAAAAACCAAGACCTTGAATTTGAAAGGAACAAGGAACGATTTGAGTTTTTAAAGTGGGGTTCTAAAGCATTCCAGAACATGCGGATTATTCCTCCGGGTTCAGGAATAGTCCATCAGGTCAATTTGGAGTACCTGGCCAGGGTTGTGTTTGACCAGGATGGTTTCTTCTACCCGGACAGTCTGGTGGGAACAGACTCCCACACAACCATGATTGATGGGTTGGGAGTGCTGGGCTGGGGTGTGGGAGGTATTGAAGCAGAGGCGGTCATGTTGGGTCAACCCATCAGTATGGTGCTGCCAGAGGTCATTGGCTACAAACTACAGGGGACACCCAACAAATTTATCACCTCCACTGACATAGTCCTTACTGTCACCAAGCATTTGCGGCAAGTTGGTGTGGTTGGGAAATTTGTGGAGTTCTTTGGCCCTGGTGTTGCCCAGCTGTCTATCGCTGACCGTGCCACCATCGCCAACATGTGCCCAGAGTATGGCGCCACCGCTGCCTTCTTCCCTGTAGACCACATCAGCATTCAATATCTGAAGCAGACGGGGAGAGACATGGAGAATCTCAGTTACATAGAAAAGTATCTAAAAGTGGTGGGCATGTTCAGAGACTACAGCAACACTGCTCAAGATCCACAGTTCACTCAGGTTGTTGAGTTGGACCTCAGTACGGTCGTCCCTTGCTGCAGTGGTCCTAAACGGCCACATGACAAAGTGGCTGTATCAGACATGAAGCAGGACTTTGAAGCATGTTTAGCGGCCAAGCAAGGCTTTAAAGGATTCCAGGTGGCTCCTGAGCGTCATGATGTTCGAGTACCATTCCAGTTTAACGGTACAGAGTATTCTCTCTCTCACGGATCTGTGGTCATCGCCGCCATTACAAGCTGTACCAACACCAGTAACCCCTCAGTCATGCTGGGAGCAGGTCTCTTGGCCAAGAAGGCAGTACAGTGTGGTCTCAGTGTCAAGCCGTACATAAAGACCAGTCTGTCTCCAGGCAGTGGAGTGGTCACCTACTACCTAAAAGAGAGTGGAGTCATGGACTTCCTCTCACAATTAGGTTTTGAGGTAGTTGGTTATGGCTGCATGACCTGCATTGGAAACAGTGGACCCCTTCCAGAGCAGGTTGTAGAGGCGATTACTCAGGGTGATTTGGTTGCTGCTGGCGTTCTATCTGGAAACAGAAACTTTGAGGGTCGTGTCCATCCCAACACACGTGCCAATTACTTGGCCTCTCCTCCGCTGGTCATTGCCTATGCTATTGCGGGCACTGTGAGGATAGATTTTGAAAAAGAGCCTTTAGCTGTGAACTCTAAGGGAAAGGAGATTTTCCTAAGGGACATCTGGCCCACACGAGAGGAAATCCAGGTGGTGGAGAGACAGTTTGTCATTCCTGCCATGTTTAAGGAGGTCTATGAGAAAGTTGAGACCCGGGAGCTCCAGACACCAAAGTCCATAACAGATGCATATGTACTGCTCAATTTGGGAGATTCTGTGACCACAGACCACATCTCGCCTGCTGGTAACATTGCACGTAACAGCCCTGCTGCACGCTACCTAACTAGCCATGGACTCACTGCAAGAGAGTTTAACTCCTATGGTTCTCGTCGAGGCAACGACGCAGTCATGGCTCGAGGCACATTTGCTAACATCCGCCTATTTAACAAGTTTATAAACAAGCAAGGACCATGTACCCTCTATCTTCCTACAGGGGAGACGATGGATGTGTTTGATGCTGCAGAAAAATATCAGCAGGCTGGTCATCCTCTCTTGATTCTGGCAGGCAAAGAGTATGGATCAGGAAGCTCTAGAGATTGGGCAGCTAAAGGACCCTTCCTGCTGGGCATCAAAGCTGTACTAGCAGAGAGTTACGAGCGGATTCATCGCAGTAATCTGGTGGGCATGGGTGTCATTCCTCTTGAGTACCTGCCGGGTGACAGCGCTGAAAGCCTCGGGCTCACTGGCCGCGAGCGATACACTGTGATGATTCCCCCACAGCTCACTCCCAGAATGACTGTGGACATCAAGCTGGACACAGGGAAAACATTTCAGGCTAAGATGAGGTTTGACACGGATGTGGAGCTTACTTACTTCCATCATGGTGGAATCCTCAACTACATGATTCGCAAGATGTCTGAAAATTAAGATGGAAAGGACACCCTCTTCAGGACATTTCACCCTAAACGCACATATCCACCATCAAGATGCTTGTTTTGTCCTATCAGTGTTTGTTTTTTTTCTTTTAAAGGGATGGTTCACCCAAAAATGAAAATTATCCCATGATTTACTCACCCTCAAGCCATTCTAGGTGTACATGACTATCTTCTTTCAGACAAACACATTCGGAGATATATTTAGAAATATCCTGGCTCTTCCAAGCTTTACAATGGTAGTGAAGCCCAAAAAATGCATCCAATGCATCATAAAAATAATCCATATGGCTCCAGGGAGTTAATAAAGGCCTTCTGAAGTGAAGTGATGGGTTTTTGTGAGAAAAATAATAACTAGCTTCCGGCAGACGGCATTTTTGGGGGGCTTCAAAATCTCGCCCCCTCATGCACTATCATTATGAAGCTTTGAAGAGCCAGGATATTTTTAAATATATCTCCGCTTGTGTCCGTCTGAAAGAAGATAGTCATATACACCTAGGATGGCTTGAGGGTGAGTAAATCATGGGATAATTTTCATTTTTGGGTGAACTATCACTTTAAGAACTAATTAATTCCTTTAGTTGTAAATGCACTGCAATGTTCAAAATAGTTATGTGATATATGTTCAGTTCTCCAAATCAGTAGTGTCTTCAGTATCTCTGAAAGATGCTGTTTTTGATTCTGATGATTATATTGGTTTGGTGGCAGTTCAGTGGGATTGAAGGGGAAGTATGAAAGCATTAGATGTTGTCAATGGCATGTTTAACTTTCTCCATTCTAACCCTACCTCAGCACTGCCAAACTGAAGTTGCATTATCTCTGTTTAGATGACATCAATGTATAAATTAATGTCTTATAATCTTATTAATTACTGTACTTAAACTGAACTTTGACACAGTTTCTTTACAGGTTATCTGCTCATATAATAATAATAATAACGCTTTTTGTTAATTATAATATTATAAAATTACACATAATGATTCTTTTTCCTATTGAAGATGTATCAATTCTGTTTCATTGTTGAATATTTTTCTTTCAGAAGTCACATGTTAATTATGCATTACCTATAAAAGACTGACATACTGAAGAAAATTTGGGTTACACTATACTTAAAGTCTTTATGTATAATGCATTATAAAGGAATTTATAATGTACGTTATAATGCAGTTTATCTTTGTAACCAAAGTTATACTGCATTTTCATTTTTGCAGATTCCTTGTTACATCTGAAATTGATTGTCATGTGTTTTAATGCTTTATACAAACATTCTAAAGGTGTAACAGTGAATAGATCGTATTATAATGTTTTATAACTGTGATTACAAGTATTCATGATAAGGTGCATCACAAGGCATAATTAATGCATTAAAATACGTTTATAATGCATTATATGAAGACTTTAAATTTGTTGCTCTCTGCAAACAAATATTGCATCAGATAAATCCCTTTAACAACTGTTGAATATGAACTCAGCTATCATGCTATACATTTGAAAGTGCCTATTTTCTCAGATTGTGTGTATAATCACTTGAATCACGTGTGCGCGTATAATTCCGGTCTTTATTTCTTGTGTTTCGTGCATTCCGGTGAAGTATGACTGAAGTGACTGAAAACAAAATCCATCCGAAGGCGATTTCACACTTTTCTTGCTGGTCGCCTGTAAAATGTAATGAATCAGGTGCGAGATTGCTGAATTTAGCAAAATATGAGAAGTTGCTCTACGCAATTTCAAATGCATTCTCTCTACTGTATTGTACAAACCTTACTGTAGTTTAACTGTATGGTAAAGCACAGAGAGGGTTAAACCCGGCAAAACCTGAACCCTGCTTTAGGGCAAAATAATATTTAGTATGTCAGAAACAAAGACATTTCGCGGCTTTTTAGAGGTTTTGTAATTTCAAGCACAGACTGCCACAATCTTGCTCTTATACTTAAGTAATCAGATTGACCTTTATTTTAATAACAAAAAATCACATCTGTAGTTTTTGTGGAAATGGCTTTACGAAA

Function

symbol description
aco1 Predicted to enable aconitate hydratase activity; iron-responsive element binding activity; and iron-sulfur cluster binding activity. Predicted to be involved in citrate metabolic process and tricarboxylic acid cycle. Predicted to act upstream of or within cellular iron ion homeostasis and response to iron(II) ion. Predicted to be located in cytoplasm. Predicted to be active in cytosol and mitochondrion. Is expressed in blood and presumptive blood. Orthologous to human ACO1 (aconitase 1).

GO:

id name namespace
GO:0005783 endoplasmic reticulum cellular_component

KEGG:

id description
K01681 ACO, acnA; aconitate hydratase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_00713100_00730032.mRNA True 4482 mRNA 0.43 18 713100 732043

Neighbor

gene id symbol gene type direction distance location
CI01000043_00700044_00705027 NA coding upstream 7899 699137 ~ 705201 (+)
CI01000043_00670862_00685333 ACER2 coding upstream 26861 669493 ~ 686239 (+)
CI01000043_00613106_00620046 METTL4 coding upstream 92613 613106 ~ 620487 (+)
CI01000043_00529899_00530472 NA coding upstream 182215 529848 ~ 530885 (+)
CI01000043_00449493_00494730 MYOM1B, MYOM1 coding upstream 218370 449493 ~ 494730 (+)
CI01000043_00732508_00746912 SEPSECS coding downstream 465 732508 ~ 748167 (+)
CI01000043_00755986_00763327 LGI2A, LGI2 coding downstream 23798 755841 ~ 763946 (+)
CI01000043_00776707_00791897 NA coding downstream 44198 776241 ~ 791931 (+)
CI01000043_00814611_00818100 NA coding downstream 82509 814552 ~ 819521 (+)
CI01000043_00825755_00838325 NA coding downstream 93617 825660 ~ 838591 (+)
G189413 NA non-coding upstream 23340 687473 ~ 689760 (+)
G189416 NA non-coding upstream 25719 687003 ~ 687381 (+)
G189425 NA non-coding upstream 48419 658279 ~ 664681 (+)
G189410 NA non-coding upstream 73222 639576 ~ 639878 (+)
G189408 NA non-coding upstream 74848 637790 ~ 638252 (+)
G189501 NA non-coding downstream 100897 832940 ~ 840609 (+)
G189528 NA non-coding downstream 117755 849798 ~ 855569 (+)
G189530 NA non-coding downstream 122444 854487 ~ 854813 (+)
G189552 NA non-coding downstream 186367 918410 ~ 919428 (+)
G190241 NA other downstream 951513 1683556 ~ 1692479 (+)
G190272 NA other downstream 1709819 2441862 ~ 2443710 (+)
G191670 NA other downstream 3171190 3903233 ~ 3909966 (+)
G191644 NA other downstream 3575905 4307948 ~ 4350614 (+)
G192454 NA other downstream 4260970 4993013 ~ 4993356 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_035274 aco1 coding NC_007118.7 CM002891.2 71463106 ~ 71486162 (-)