CI01000043_01366462_01369312


Basic Information

Item Value
gene id CI01000043_01366462_01369312
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 1366462 ~ 1379702 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_01366462_01369312.mRNA
ATGCCCGTGGATGGAGTGCGCTCGCTCGCTGTAACGCAGGTGATGATGAGACAGTGTGCTGCCTTGGTTGGTGAAGACCAGCCCCTTTGCCCTGACCTGCCTGAGCTTGACCTCTCTGAGCTGGATGTCAGTGACCTCGATGCAGATAGCTTTCTGGGAGGACTCAAGTGGTACAGCGACCAATCAGAAATCATTTCCAGTCAGTATGGCAATGAGGCATCAAACCTGTTTGAGGTAAAGAGGGTCATTGTGCTGTGATCTTTACTTATCTGATCATGCATGCTTGTCTTTTATAAAATTAGATATGATTCTAGCCTCATGCAGTTTATTGTGCGAGATTGTAACTGTGAGTGTGGAATTCTTCAAAGATGGCCTTTCCAATCAGTGCTGTTTATTAGTTAATAACAGAGCTTTACTCATTGGGAATGTGCATTCACCCATGCTGTCTGATAATTGGGGTGAGGTATCATGATAAGCACCCAACCTTTGCCCAGTACTTAAGGTCAGTGTTTGTACCTTTTACTACAATCTTGGGCCCAATGCACTGAAATTTATGGCTGTTTAAATGCGCATTCCTCTTGATGTTCCAGAGTAATGGTCAGTAATAATAGAGTGTGACAGTGTTTGCCCACTTTTTGAGCAACCTTGGTTCTGGAAGTATTTTTTTCCATAGGGATGTTAAAAAAAAAAGTTTGTTTAGGAGTTATAAACCATGAACCAAACCAACCAGCTACGATCATCACAAACTTTGATCAAAAGCAAAAAATATTTAAAAATCAGACAAAAAGACAAAAGCACAAGAACTTCATATGACGCATTGGGAATGACATAAA

Function

NR:

description
proliferator-activated receptor gamma coactivator 1 alpha, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_01366462_01369312.mRNA False 833 mRNA 0.41 2 1366462 1369887

Neighbor

gene id symbol gene type direction distance location
CI01000043_00930835_00959810 BRAFLDRAFT_59675, DHX15 coding upstream 406251 930329 ~ 960211 (+)
CI01000043_00898380_00913554 NA coding upstream 452815 898380 ~ 913647 (+)
CI01000043_00878804_00886856 NA coding upstream 479492 878804 ~ 886970 (+)
CI01000043_00872741_00876715 NA coding upstream 489477 872741 ~ 876985 (+)
CI01000043_00825755_00838325 NA coding upstream 527871 825660 ~ 838591 (+)
CI01000043_01383746_01406582 PPARGC1A coding downstream 12292 1382179 ~ 1406593 (+)
CI01000043_01423076_01424727 NA coding downstream 52917 1422804 ~ 1424730 (+)
CI01000043_01626021_01650266 ADGRA3 coding downstream 256134 1626021 ~ 1651813 (+)
CI01000043_01704935_01732125 NA coding downstream 334946 1704833 ~ 1732221 (+)
CI01000043_01842605_01846888 NA coding downstream 470196 1833978 ~ 1846921 (+)
G189565 NA non-coding upstream 284170 1082113 ~ 1082292 (+)
G189487 NA non-coding upstream 338328 1027241 ~ 1028134 (+)
G189477 NA non-coding upstream 346549 1019614 ~ 1019913 (+)
G189461 NA non-coding upstream 388031 978016 ~ 978431 (+)
G189555 NA non-coding upstream 443946 922316 ~ 922516 (+)
G189445 NA non-coding downstream 45069 1414956 ~ 1415629 (+)
G190206 NA non-coding downstream 161825 1531712 ~ 1532051 (+)
G190216 NA non-coding downstream 187270 1557157 ~ 1557452 (+)
G190220 NA non-coding downstream 196758 1566645 ~ 1566951 (+)
G190221 NA non-coding downstream 204619 1574506 ~ 1574725 (+)
G190241 NA other downstream 313669 1683556 ~ 1692479 (+)
G190272 NA other downstream 1071975 2441862 ~ 2443710 (+)
G191670 NA other downstream 2533346 3903233 ~ 3909966 (+)
G191644 NA other downstream 2938061 4307948 ~ 4350614 (+)
G192454 NA other downstream 3623126 4993013 ~ 4993356 (+)

Expression


Co-expression Network