CI01000043_01704935_01732125


Basic Information

Item Value
gene id CI01000043_01704935_01732125
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 1704833 ~ 1732221 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_01704935_01732125.mRNA
GTATAAATTATTCCTGAATCTTAGAAAGTCAGGAAGAAAGTCTTCAATATAATGACATAATTTTAACAGCAGCTACTGAATTTGAATAGTTGTAGTGTGACCATGTCCACCCCAGTCAAGAGGACTCAGTGGGATGAAGACCTGTCTCAGTTTCGCAAGGATTATGGCCTTTCCAAGAAAGTGCTGCTCAACTGCTGTCTAGTCAGACGGATCATCGCCTGGGCTTCCCCCAACAAAAAAGGGGTGTTCATGTTCAGCTGGGATATTCTGCAGTGCCTTCATGGAAAGCTAACACAGGCATCTGTTGAGACCGTTTGGCTGAGACTGTTGCTTAAAACTACAAGCTATGATAAAAACCCACAATAATTGCCTTTAAAAACAGTATAAAATGTTCTCTGTAGCATTCATGAATATAAATGAGAGAAAAATAGTCAGTATTCCTTTTACTTTGACTGTTGCCTA

Function

NR:

description
Kv channel-interacting protein 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_01704935_01732125.mRNA True 462 mRNA 0.40 2 1704833 1732221

Neighbor

gene id symbol gene type direction distance location
CI01000043_01626021_01650266 ADGRA3 coding upstream 53020 1626021 ~ 1651813 (+)
CI01000043_01423076_01424727 NA coding upstream 280103 1422804 ~ 1424730 (+)
CI01000043_01383746_01406582 PPARGC1A coding upstream 298240 1382179 ~ 1406593 (+)
CI01000043_01366462_01369312 NA coding upstream 334946 1366462 ~ 1379702 (+)
CI01000043_00930835_00959810 BRAFLDRAFT_59675, DHX15 coding upstream 744622 930329 ~ 960211 (+)
CI01000043_01842605_01846888 NA coding downstream 107862 1833978 ~ 1846921 (+)
CI01000043_01896926_01915626 KCNIP4 coding downstream 164705 1896926 ~ 1915626 (+)
CI01000043_01970557_01977108 NA coding downstream 238336 1970557 ~ 1977689 (+)
CI01000043_01992845_02000632 NA coding downstream 260624 1992845 ~ 2001617 (+)
CI01000043_02033302_02075904 NA coding downstream 301081 2033302 ~ 2076148 (+)
G190256 NA non-coding upstream 2503 1692620 ~ 1702330 (+)
G190292 NA non-coding upstream 65512 1638856 ~ 1639321 (+)
G190290 NA non-coding upstream 71631 1632833 ~ 1633202 (+)
G190249 NA non-coding upstream 110813 1587546 ~ 1594020 (+)
G190221 NA non-coding upstream 130108 1574506 ~ 1574725 (+)
G190270 NA non-coding downstream 54844 1787065 ~ 1797398 (+)
G190262 NA non-coding downstream 116242 1848463 ~ 1895241 (+)
G190230 NA non-coding downstream 188811 1921032 ~ 1927918 (+)
G190306 NA non-coding downstream 221273 1953494 ~ 1953807 (+)
G190241 NA other upstream 12354 1683556 ~ 1692479 (+)
G190272 NA other downstream 709641 2441862 ~ 2443710 (+)
G191670 NA other downstream 2171012 3903233 ~ 3909966 (+)
G191644 NA other downstream 2575727 4307948 ~ 4350614 (+)
G192454 NA other downstream 3260792 4993013 ~ 4993356 (+)
CI01000043_05114193_05114497 BOLA3 other downstream 3381665 5114193 ~ 5114497 (+)

Expression


Co-expression Network