CI01000043_02443106_02445250 (MARVELD3)


Basic Information

Item Value
gene id CI01000043_02443106_02445250
gene name MARVELD3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 2442964 ~ 2446307 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_02443106_02445250.mRNA
ATTTTTGTTTATGTAGCCTATATAAAATTATGCTAGCAATATAAATAAATGAACAATGTATTCAAGACCTTTGTTAACATTGTTTACATAATACACAATAATATCCTTTAATGAAAAACAGTATTTTACCTTTATTAAATTAAAAATAAAGTTCTGCCAATCCCCTCCAGACGCAGCCACTGTGTGGCGTCATGACGCATCTGTGGGGCGGAGTCAGAGTCAGACAGGTTTCACAGGTGTGTAGCTCCGTAACAATAACACCAGAGAACTGAACGAAACTCCGACAAATCACTGCTTATTTCGTTTATTTTGGTAAAAGGTAGGCTCTGGATTAATTCATTTTTTTTATTACTGAGTTACGTGTAGTTTTTCGTTACCTAGTACGGTTTATTTTGGTGATTTGATTCAGGAAATTAGACTTCTTCATTCTTGTATGTGGAGTGAGTGACTAGATAAAACGATTACTTTACTTTATAAAAGTAATATGATTAAACTGGAAAATATTTTTAGATGAGAGATTGAATATTGAATGTTTAAAACAACAACCAGCTCAATCACATCAGTTAATTGATAATGTAACTCCGATGTCTTGTGTGTTGGTTTCGTTATCCGGGGACTTTAGCTACTCACGTGAAAAGTTTGAAACACAGGAACGTTCAGTGCAACATCCACTAATGTTTTGTAAAGGTTAGCCTATGTAAATGATGTTAAGAGAAACGTTAGAACAACGTTATTGGAACATCTTTATGAGGTGTTTACTTGAACATTCTCATAATGTTAAGAGAAAACGTTCTGAGAACATTTTTGGAACATCCTTATGATATTATTTGTACTTGATGAATGTTAATGTTAACCTTCTTGGAATATTACAAATAAATGTTCAAAGAATGTTATATTGTGAGTAAAAATAACTAAGAATGTTGTACTAACATTATTAAAGCCTTTTAAATAATGTTCTAATCATGACAAGAAAACTGGACACTAAAGTTTTAGAAACATTGCAAATCACTGTTCCCACAACGTTTATAGAACATAATGCGTTCTCGTTTCTTAGACAATGGCAGAATCAAACCGGCATCATCACACAAGGGACAAAGACTACTCTAGTCGAGACAGGAGAGATGAAGGGAGACGTGAACACAGACAGGACAGGAGATACAGAGAGGACAGAAGAGCACCTGATGAAGACGACAGATCACAAAGCCACAGAGAGAAACAAAGATATGCTGACACACAGAGGGACCCCCGTGTGTACGACACCACTCGTTATCATAGCATCTGTCAGGCCATGGAATTCTTCTTAAACTTGTTGATTATCATCTGTGCTGGAGTGAACCACAGTAACTCGGGTCGGTATCGGGATATCGCCAGCTTGGGCGGTCTGTACCAGTACTATTATGGAGGAGCCAATGCATTCACTGGAGCAGAGGCACAGAAGGTCCAGCAGCTCGACGACCAGTTTTACCAGCTCAAACTGCCCCCTTACGTCTACAGCATGGCATGTGGCGGGGCATTGATGCTTTATGTTTGTGCCATGCTGGCTCTCGGAGTGTTTCGCATGCCCTACCGCTTCCCCCCTCTGCTGCTGGCTGAAGCCCTGCTGGATGCGCTCATAGGTCTTGGTTTTATTCCTGCTCTCGCTTTCTACTTCATAAAGCTGCAGGAGATCTACAACAACCCCATCTGTAAAGAGAGGGAAGCGATGTACAGCAGCAAAGGTCACAGAGGATTTGAGTGCAATCTCAATGGGGCAGACATAGCAGGAGGGTTGTTTGGTGTTCTGGGGATTATTATTTTCCCCATAAGTGCAGTGTTGGCCATCAAAGCCTTCATAAAAGTGCGGAAGATGAAGCAGAGGCCGACAGAAGACAACAACCTCTGAGTGTTATGCCATTTCATGTATTTGGGAAGCACGAGAGATTTTACTTGCGCCCATGTAAATGCGTTGGTTAGTATTTTTACAATGTCAGAAGGATATATATTTTTCAACTTCTAATTTTTTTTGCTTTCAAGTTTATTATAAA

Function

symbol description
marveld3 Predicted to be involved in bicellular tight junction assembly and negative regulation of epithelial cell migration. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in bicellular tight junction and cytoplasm. Orthologous to human MARVELD3 (MARVEL domain containing 3).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_02443106_02445250.mRNA True 2024 mRNA 0.39 2 2442964 2446307

Neighbor

gene id symbol gene type direction distance location
CI01000043_02302020_02310202 ZNF821 coding downstream 132762 2301573 ~ 2310202 (-)
CI01000043_02267429_02272738 ELP5 coding downstream 170226 2267201 ~ 2272738 (-)
CI01000043_02252982_02264248 CTDNEP1B, CTDNEP1A, CTDNEP1, DULDA coding downstream 178716 2251846 ~ 2264248 (-)
CI01000043_02245322_02249390 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP coding downstream 193509 2244688 ~ 2249480 (-)
CI01000043_02234048_02242460 NA coding downstream 200504 2233589 ~ 2242460 (-)
CI01000043_02555479_02574821 HNF4B coding upstream 108967 2555274 ~ 2574821 (-)
CI01000043_02725571_02730393 NA coding upstream 278845 2725152 ~ 2730860 (-)
CI01000043_02868129_02876445 NA coding upstream 421109 2867416 ~ 2876465 (-)
CI01000043_02912881_02924260 NA coding upstream 466569 2912876 ~ 2924415 (-)
CI01000043_03133480_03136057 NA coding upstream 687122 3133429 ~ 3136325 (-)
G190824 NA non-coding downstream 12686 2428878 ~ 2430278 (-)
G190787 NA non-coding downstream 75772 2366847 ~ 2367192 (-)
G190785 NA non-coding downstream 79880 2362869 ~ 2363084 (-)
G190784 NA non-coding downstream 80964 2361779 ~ 2362000 (-)
G190783 NA non-coding downstream 82038 2360208 ~ 2360926 (-)
G190827 NA non-coding upstream 3470 2449777 ~ 2450301 (-)
G190829 NA non-coding upstream 5022 2451329 ~ 2451609 (-)
G190844 NA non-coding upstream 45914 2492221 ~ 2492480 (-)
G190845 NA non-coding upstream 46486 2492793 ~ 2493029 (-)
G190846 NA non-coding upstream 47072 2493379 ~ 2493715 (-)
G189881 NA other downstream 1559796 814747 ~ 883168 (-)
G191296 NA other upstream 602065 3048372 ~ 3049864 (-)
G192109 NA other upstream 1885604 4331911 ~ 4332726 (-)
G192980 NA other upstream 3010190 5456497 ~ 5458414 (-)
G192947 NA other upstream 3147374 5593681 ~ 5618440 (-)
G193313 NA other upstream 3809265 6255572 ~ 6256279 (-)

Expression


Co-expression Network