CI01000043_02912881_02924260


Basic Information

Item Value
gene id CI01000043_02912881_02924260
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 2912876 ~ 2924415 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_02912881_02924260.mRNA
TTATGCCTTGAGCACTCTTTTCAACAGGGGCTGACCCCTCACTCGGAGGTTAAGATGACATACAAGCTATTTTCAAAGGCCCTGCGTATCGTCTCAAAGGAAGGACTCACACTCCGCAAGACAGAGTAAAATACTCCATCAAAGAAACTCATGGAATGACACAACAGGCAGTCAAGGTGTCACGGAAATGTGAGTCAGAGAAAAGTGAGGGAACGATGGAAAGGGAACAGGCGGTAGAGTGTGGGCAAGCTCCAACCATCATGTGCTTACAACATGCACTGAGTATGTACTGGTTCACTGAGAGAGTTGGGGATGTATCAGCACGTACACTTTACGGTACACCCTCCGGATCAGGTTTCAGGAAGCTTGTGTTTGTGTGTCACTATGCTAATCTACAAGGGCTAAGACAATGGAAAGATCTGGCTGGGTGCCATGGCTTGAAAATCCCCCTGGCTCTTAGACTTCATGATGGAGCCTTCTTTTTTCAGCAGGGTCATCTAACATCTACGATAAGAGCTCCATGGTCCCCAGCGCACCAGGCTTCAACCCCACCACAGTGGTGTCCCCCTTCAGCCCGGCCCAACCCAGGACCACGGGTCTCTCCTCCGCTTGTGGAAGTATACCAAACATGTCCCAACAGGCCACCAACAGCCCAGCATGGAACACAACGCTCCGCTCAACCCACAAAGAAAGAGAGAGAGAGCGAGAGAATGTTTGTCTCTCTCTACGCCGAAATCATTTTGCTCGGCTTCAAGAGGCACAAGATTACAGGATGGGAAATTATAGTACACAAACATACGCTCGATACATGTGGCCATGATCAAAATACTTGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_02912881_02924260.mRNA True 838 mRNA 0.49 7 2912876 2924415

Neighbor

gene id symbol gene type direction distance location
CI01000043_02868129_02876445 NA coding downstream 36411 2867416 ~ 2876465 (-)
CI01000043_02725571_02730393 NA coding downstream 182016 2725152 ~ 2730860 (-)
CI01000043_02555479_02574821 HNF4B coding downstream 338055 2555274 ~ 2574821 (-)
CI01000043_02443106_02445250 MARVELD3 coding downstream 466569 2442964 ~ 2446307 (-)
CI01000043_02302020_02310202 ZNF821 coding downstream 602674 2301573 ~ 2310202 (-)
CI01000043_03133480_03136057 NA coding upstream 209014 3133429 ~ 3136325 (-)
CI01000043_03138222_03139281 NA coding upstream 212751 3137166 ~ 3139633 (-)
CI01000043_03325623_03351622 DHX38 coding upstream 400973 3325388 ~ 3353062 (-)
CI01000043_03356337_03361772 CYB5B coding upstream 431636 3356051 ~ 3363143 (-)
CI01000043_03377513_03382227 NA coding upstream 452490 3376905 ~ 3382425 (-)
G191299 NA non-coding downstream 28329 2880396 ~ 2884547 (-)
G190873 NA non-coding downstream 318284 2594314 ~ 2594592 (-)
G190869 NA non-coding downstream 364576 2548070 ~ 2548300 (-)
G190861 NA non-coding downstream 385183 2527180 ~ 2527693 (-)
G190849 NA non-coding downstream 417188 2495474 ~ 2495688 (-)
G191483 NA non-coding upstream 226416 3150831 ~ 3151071 (-)
G191489 NA non-coding upstream 243482 3167897 ~ 3168172 (-)
G191491 NA non-coding upstream 245955 3170370 ~ 3170592 (-)
G191506 NA non-coding upstream 286322 3210737 ~ 3213930 (-)
G191510 NA non-coding upstream 291734 3216149 ~ 3216495 (-)
CI01000043_02245322_02249390 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP other downstream 663396 2244688 ~ 2249480 (-)
G189881 NA other downstream 2029708 814747 ~ 883168 (-)
G191296 NA other upstream 123957 3048372 ~ 3049864 (-)
G192109 NA other upstream 1407496 4331911 ~ 4332726 (-)
G192980 NA other upstream 2532082 5456497 ~ 5458414 (-)
G192947 NA other upstream 2669266 5593681 ~ 5618440 (-)
G193313 NA other upstream 3331157 6255572 ~ 6256279 (-)

Expression


Co-expression Network