CI01000043_03600460_03603309


Basic Information

Item Value
gene id CI01000043_03600460_03603309
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 3600275 ~ 3603404 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_03600460_03603309.mRNA
CTATATTTTCCAGATCTGAGGATGTTCTCATATGTTCACACTCTTTCCATCTGCATATACCCAATGCTTAGATGATTTCAAGCAGTCCTACAGAAAATAAAATGTGAAAAGCGCAGGTATGTTTAGAGGCCTCTTAAATTCTGAGAACAAATTCATCTCTTATATGGCCTGAAATAGATGCAAACATGGGGGCAGGTGAAGGCAAATTCTTGGCATTCGATCTGGTTAGCAGAAACGATCTATTCAGGCTTCTGCAGAAGATCGGCTGCCCCCCACAACTGCTGGCTGTCGTCACCTCGTTTCACGATAACATGCACAGCACAGTTTGTTTCAATGGCGCAACATCTGGGTCCTTCCCCTACGCCTTTAAGGACTGCAGCGAGGGAGTCTACATCCACACCAGGGCTGACGGCAAGCTATTCTACATCGCTCGTCTCCGCGCCAAGACTAAAATCACAGAGGTACTCATCCGTGAGATGCTCTTTGCCGACGACGCAGCCTTGACGTCCCACACCGAAGATGGCCTGCAGCAGCTTGTCAGTTGCCTCTCCTATGCCTGCAAGGAGTTTGGACTGACTATCAGTCTGAAGAAAATCAACGTCATGGCCCAGGAAATAGACTCCCCTCCAACCAACGCCATTGATGGGTACAATCTGAAAGTTGTTGAGAACTTCACCTACCTCGGGTCTACCATCTCCAGCTCTCTCTCCATCGACGCTGAGATAAACGGCAGGATCGCCAAGACAGCAGCGGTCATGGCCAGACTGAACCAGAGGGTCTGGAACAATATCAACCTCACAGAGAAGACCAAGGTGCATGTCTACAAGGCCTGCGCGCTCAGCACACTCTTCTATAGCAGTGAGACATGGACCACTCATGTGAGACATGAGAAGAAACTCAACAGCTTTCACCTGAGGTGCCCGTGGCGCATTCTGCGCACCCAGTGGCAGGACAAAGTACCTAACACAGAGGTTCTAGAATGCGTCGGCATGAGAAGCATATCTGCCATACTTAGTGGGAAGGAGAATGGGCCCTGGCCGCATTCCCAAGGACCTACTGTATGGCGAGCTGGCACAGGGCTCACGAATAACTGGTCATCCACAACTGCGCTACAAAGATATCTGCAAGAAAGACATGAAGCTGTCTGACATCAACATCAGCACGTGGGAGAGCCGTGCAGAACACTGCTCTGCCTGGCATTTCAGTGTCAGACAGGGCGTACAGAAAGCCAAGGAAACCAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_03600460_03603309.mRNA True 1243 mRNA 0.50 3 3600275 3603404

Neighbor

gene id symbol gene type direction distance location
CI01000043_03292361_03301513 NA coding upstream 298762 3292361 ~ 3301513 (+)
CI01000043_03270751_03284680 NA coding upstream 315513 3270751 ~ 3284762 (+)
CI01000043_03157095_03221503 NA coding upstream 377652 3156717 ~ 3222623 (+)
CI01000043_02945803_03044928 ZFHX3 coding upstream 555347 2945803 ~ 3044928 (+)
CI01000043_02884506_02898339 NA coding upstream 701911 2884418 ~ 2898364 (+)
CI01000043_03630982_03636231 PSMD7, PSD7, PSMD7.L coding downstream 25900 3629304 ~ 3636429 (+)
CI01000043_03678916_03691863 ZNF143A coding downstream 75412 3678816 ~ 3692052 (+)
CI01000043_03696702_03699679 NA coding downstream 93066 3696470 ~ 3699879 (+)
CI01000043_03718802_03730935 TRIP4 coding downstream 114556 3717960 ~ 3731638 (+)
CI01000043_03733099_03736327 NA coding downstream 129028 3732432 ~ 3736375 (+)
G191265 NA non-coding upstream 27703 3572246 ~ 3572572 (+)
G191047 NA non-coding upstream 56901 3479286 ~ 3543374 (+)
G191228 NA non-coding upstream 149141 3449165 ~ 3451134 (+)
G191226 NA non-coding upstream 153054 3447012 ~ 3447221 (+)
G191224 NA non-coding upstream 167381 3432596 ~ 3432894 (+)
G191272 NA non-coding downstream 40333 3643737 ~ 3644012 (+)
G191273 NA non-coding downstream 42434 3645838 ~ 3646264 (+)
G191275 NA non-coding downstream 45672 3649076 ~ 3649572 (+)
G191277 NA non-coding downstream 47836 3651240 ~ 3651469 (+)
G191278 NA non-coding downstream 48521 3651925 ~ 3652233 (+)
G190272 NA other upstream 1156565 2441862 ~ 2443710 (+)
G190241 NA other upstream 1907796 1683556 ~ 1692479 (+)
G191670 NA other downstream 299829 3903233 ~ 3909966 (+)
G191644 NA other downstream 704544 4307948 ~ 4350614 (+)
G192454 NA other downstream 1389609 4993013 ~ 4993356 (+)
CI01000043_05114193_05114497 BOLA3 other downstream 1510482 5114193 ~ 5114497 (+)
CI01000043_05169578_05171795 CLEC3A other downstream 1566201 5169578 ~ 5171848 (+)

Expression


Co-expression Network