CI01000043_03733099_03736327


Basic Information

Item Value
gene id CI01000043_03733099_03736327
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 3732432 ~ 3736375 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_03733099_03736327.mRNA
ATTTAAAAGGATTATGTCCAGGTGCAATATCGCAACCCGGCTCTGTCCTTGATTAATTATAAATCAATGAAGTCTATTGCAGCTCAGAGGGCTCTAATCTTTTCTCTTTCATCCAGTGTAAATGTCGGTGTGCCTCAGCCACTCTGTCTGCTTTAACCTGAGAGAATCTGTCTACCTGAGTGCTTTTCAAAAACCAAACACCTCTTGACAAACCATGCACAGAATGAATTTGCACAGAGAGGTGAATGTCATATGTCATATGGCTAGTCTGATGCCCCTGCTCAGACTGCATATGCTTAGAATGAATATTCTGGGTTTAAAACCATTAATATAAGCACAATTCCTTTTGAATGGTTTGTAATAATGTTACATCTTATGTTGTTAATTGCATTATTTTAGTGTCGTGTATTACCATGATGGTGTTTTGTATTTGAGTGCATGAAACTTCATGGACCTTCTATGTATTAATATTTACTTCAGTTTGTGGAAAAGCTACTTGTAATGATTCATCATGTGGCTTTTCTTTTTACCCCTTTTGTTATTATGGTGGATGTCAGTATATGTAAAAGATACAAAACAAATTTAAGGAACCAGTGTGGCTGTGTCACCACCCCCCACCCCCCGAGGGATAGCCACCTTGTTGTGTTCGGGGGGCTCGCGTGACTCAATGACCCCTAGAGCTATACCAGCAGGAGCTTATAGTCTCCGGGTAGGGTCACTCAAGCCGGACAGGTCAAAGGGTAGAAGACTGACAAAACGTGATCCACCTCTAGGTTGGGGGTTGGGCACAGGGCTAACAACCCAGTCCCTTAAAAAAAGCTTTGTTATGGAAACAGCAACAGAGAGAATCAAAACTTCTGTGTGTGATGGGCTTCCAGAGTCATTGGAAGATACTCAAATGAATGCCAGTGATGAAAGCCGAAAGGAAGCCACTGACACGAGGATGGAAATCCTGAACGCCAAATACAAGACCAGGATAGGATTCTGGAATGTGCAAACCATGTTTGAAACCGGAAAACAGAGATGTGATGCTATGATCTACACATCCTTGGTATCATGTTATGCTCCCACAAATGGCAGTGATGAAGAAACGAAGGATACTTTTTATGACCAAATACAAGCTGAGTTAGAAGACACAGCACAACATGATTTGAAGTTTGTGATTGGGGACTGGAATGAAAAGTTGACCTGGTGCTCCACCAATGGAAGAGACAGGAACCAGATAGACCACCTGATGATAAATGGCATGTGGAGACAACCGCTCCTGGACGTCAGAGTGAAGAGGGGAGCTGATGTTGGCAGCGACCACCATCTGGTCATAGCAGCACTGACACTTAGGAGAATCAGGCAAAAAAAAGAGCAGGACGCCAACTGTTTGGGGGCTAACCCAATAATATATTATAATGTAGAGAATCGAGGTGATCCCAGAGTGAAGAACGCTTTCATTTTAAAGCTGAAAAACAGATTCCAGGCTCTGGCGGGCAATGCGAACTTCAAGCTCCCAGACCCAGATGAAGTCAACACCAAGTGGGAGAAAATCACTCAGAGGGTGATTATGGAGAGAGGGCTCCGAGCGACTTCTCCCCAGTCGTCGGACAATTCTTACCGCAGAGAGAAGCGAGTCGCTCCCCGGCTGCTTTTCCAGCCCTCGGGCTGGTGGTCTGGCTGTGGCAATAACAGCGCAAGCGGAATCTGCCTGGAATCCTCTTTCTTGTGTTTGTCTTGTTCGCTCAGTGGCTGTTTTCTCGGGCTTTTCGGCACTGATCCTGTGGAGTGTCATAAAAGCCTGTGTTTGAGGTACAGGCAGTGTGAGCGCCTTTTCATCCTCTGTTTGAGTGCTCACAGCTTGGAGGCCAACCATAAATCCAGTCTGGGAAGCAGGAGGGAGTGGATTGGGGGTTGAGGGAGCGGGGGCGAGAGAGAGAAAGAGAGAGAGAGAGGCTGGGCGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_03733099_03736327.mRNA True 1951 mRNA 0.46 4 3732432 3736375

Neighbor

gene id symbol gene type direction distance location
CI01000043_03718802_03730935 TRIP4 coding upstream 794 3717960 ~ 3731638 (+)
CI01000043_03696702_03699679 NA coding upstream 32553 3696470 ~ 3699879 (+)
CI01000043_03678916_03691863 ZNF143A coding upstream 40380 3678816 ~ 3692052 (+)
CI01000043_03630982_03636231 PSMD7, PSD7, PSMD7.L coding upstream 96003 3629304 ~ 3636429 (+)
CI01000043_03600460_03603309 NA coding upstream 129028 3600275 ~ 3603404 (+)
CI01000043_03806399_03849817 ZNF609 coding downstream 68167 3804542 ~ 3850527 (+)
CI01000043_03873745_03893313 GRAMD2, GRAMD2A coding downstream 137099 3873474 ~ 3894031 (+)
CI01000043_03897396_03898300 NA coding downstream 160956 3897331 ~ 3899232 (+)
CI01000043_03945066_03946592 NA coding downstream 208350 3944725 ~ 3946592 (+)
CI01000043_04053003_04164783 NEO1A, NEO1 coding downstream 316628 4053003 ~ 4164783 (+)
G191281 NA non-coding upstream 76747 3655461 ~ 3655685 (+)
G191278 NA non-coding upstream 80199 3651925 ~ 3652233 (+)
G191277 NA non-coding upstream 80963 3651240 ~ 3651469 (+)
G191275 NA non-coding upstream 82860 3649076 ~ 3649572 (+)
G191273 NA non-coding upstream 86168 3645838 ~ 3646264 (+)
G191669 NA non-coding downstream 174465 3910840 ~ 3911450 (+)
G191685 NA non-coding downstream 207366 3943741 ~ 3944009 (+)
G191645 NA non-coding downstream 275941 4012316 ~ 4041221 (+)
G191647 NA non-coding downstream 318849 4055224 ~ 4081927 (+)
G191646 NA non-coding downstream 405819 4142194 ~ 4144967 (+)
G190272 NA other upstream 1288722 2441862 ~ 2443710 (+)
G190241 NA other upstream 2039953 1683556 ~ 1692479 (+)
G191670 NA other downstream 166858 3903233 ~ 3909966 (+)
G191644 NA other downstream 571573 4307948 ~ 4350614 (+)
G192454 NA other downstream 1256638 4993013 ~ 4993356 (+)
CI01000043_05114193_05114497 BOLA3 other downstream 1377511 5114193 ~ 5114497 (+)
CI01000043_05169578_05171795 CLEC3A other downstream 1433230 5169578 ~ 5171848 (+)

Expression


Co-expression Network