CI01000043_03750004_03772251


Basic Information

Item Value
gene id CI01000043_03750004_03772251
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000043
NCBI id null
chromosome length 7746009
location 3749842 ~ 3772506 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000043_03750004_03772251.mRNA
AAGCGACGTTAAAAGCCATAGTGGTAACAAACAACCGAAGCGAGGCCAGGAAAAATTTGTGTCACTGCCTGAATGGCTAAATAGTTTAGGGGCGACAGTCGTTGGATGATGTTGGGCAACGATCCACTTCCTTTTGTCATTTTGCTCTGATGTTATAGGTCTTAATGCGTTTAAAACAGGAAATCCAGCTTGAAGGTGAACAGCTGATGCACTGCAGCAGAGAAGCAGAAGCAGCTTTTCCCTCTAGAGACAAGCATGAGTGCGCTTCCAAATATAACCAAAAAGCTCTCTAATTACTGCAGTCACGATCTAGGGCTGAATCTTCCATTCAAAACACTGTTTGATTGCTTAACAAGGACATCTTTTCTGTCTTCTTTGCCACGCTTCAATTATGAGTCTGATTCAAATGGAAAACCATGTCCAGTTGCTTTCAAGTACTGGCGAGATTCTACCAGACAGTTTGAAAAAGGATTTCTCTTTGATTGTGAAAGCCCAATTAGAGGACGGGAATGCCTGCCATGCCGGTCTTGTTTGCGGCAGCCTTTTGGGGAAATTCCAGCCATATCTCAAGGCTCTCAAAGCAACACATTCCTCTTTCAGCTCAGGCAGTGGCTGCTGTCCAGGCTGGGATTCTGCCAGTGTGTTCCAGCTATAAGCACTGTGATGAGAGATTCATATTGTCCAGTGCAGAGGAGGGCAGCAAAGGAGGCAGGCAATCTCCTGCACTGTGGCGCAGTGGTAATAGGGCCGGCCCGCTTGGCTGCACTCAATCTCGGCCAAATAAAAAGGCTTCATTGGCACAGACACCCTGATACAGGAGAAGCACTAAGGAAGAGGTCCTTCAAACAGAAAGGGAATAGGAGAAAAAGGCAGGCTGTCAGGATCACTGCTTTCATGCTCTATTTCAGCATTTTCAGTTGTACTTCACTAGCATAAGACCAACCCTCAATGGAACATAAAAAGCTCAGCAGCCTTTTCAAAAAAAACAAAACAAGGAAAAAAAGCCGGTAAACCCCTGCAAGCCAAAGACCATCTGGGAGCTGTAGTGAGAAATGCCTGAGCAGCATTCCAGCTTCATGACGGCTAACAGTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000043_03750004_03772251.mRNA True 1098 mRNA 0.46 3 3749842 3772506

Neighbor

gene id symbol gene type direction distance location
CI01000043_03636807_03672561 NA coding downstream 77162 3636471 ~ 3672680 (-)
CI01000043_03548130_03586519 KARS coding downstream 162906 3547810 ~ 3586936 (-)
CI01000043_03539141_03543311 CASC3.L, RPL13.S, RPL13 coding downstream 205950 3539105 ~ 3543892 (-)
CI01000043_03452739_03529381 CPNE7 coding downstream 220149 3451591 ~ 3529693 (-)
CI01000043_03377513_03382227 NA coding downstream 367417 3376905 ~ 3382425 (-)
CI01000043_03782397_03783190 NA coding upstream 8806 3781312 ~ 3784125 (-)
CI01000043_03912564_03929022 CHRNA7 coding upstream 139420 3911926 ~ 3929022 (-)
CI01000043_04168896_04172758 RS17, RPS17.S, RPS17 coding upstream 396365 4168871 ~ 4172758 (-)
CI01000043_04185319_04204509 CSNK1G1 coding upstream 412602 4185108 ~ 4205041 (-)
CI01000043_04292518_04294909 NA coding upstream 519677 4292183 ~ 4294909 (-)
G191826 NA non-coding downstream 11849 3736599 ~ 3737993 (-)
G191627 NA non-coding downstream 37426 3706157 ~ 3712416 (-)
G191620 NA non-coding downstream 46220 3696571 ~ 3703622 (-)
G191601 NA non-coding downstream 101510 3648049 ~ 3648332 (-)
G191582 NA non-coding downstream 211161 3538270 ~ 3538681 (-)
G191891 NA non-coding upstream 80338 3852844 ~ 3853158 (-)
G191929 NA non-coding upstream 154760 3927266 ~ 3927479 (-)
G191932 NA non-coding upstream 171273 3943779 ~ 3943998 (-)
G191937 NA non-coding upstream 185830 3958336 ~ 3958563 (-)
G191938 NA non-coding upstream 186221 3958727 ~ 3958959 (-)
G191296 NA other downstream 699978 3048372 ~ 3049864 (-)
CI01000043_02245322_02249390 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP other downstream 1500362 2244688 ~ 2249480 (-)
G189881 NA other downstream 2866674 814747 ~ 883168 (-)
G192109 NA other upstream 559405 4331911 ~ 4332726 (-)
G192980 NA other upstream 1683991 5456497 ~ 5458414 (-)
G192947 NA other upstream 1821175 5593681 ~ 5618440 (-)
G193313 NA other upstream 2483066 6255572 ~ 6256279 (-)
G193922 NA other upstream 2790834 6563340 ~ 6566039 (-)

Expression


Co-expression Network